DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm3 and Ctdp1

DIOPT Version :9

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_080571.2 Gene:Ctdp1 / 67655 MGIID:1926953 Length:960 Species:Mus musculus


Alignment Length:78 Identity:15/78 - (19%)
Similarity:34/78 - (43%) Gaps:17/78 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LVLEIKDVLVH------PDWTYQTGWRF-----------KKRPGVDYFLQQCSRNFEIVIYTSEQ 189
            |::::...|:|      |..:.:..:.|           :.||....||::.::.:|:.::|...
Mouse   185 LMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGS 249

  Fly   190 GMTAFPLLDALDP 202
            .:.|..:...|||
Mouse   250 RLYAHTIAGFLDP 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 15/78 (19%)
HIP1_clath_bdg 276..332 CDD:293123
Ctdp1NP_080571.2 biotinyl_domain 27..111 CDD:133459
FCP1_euk 177..323 CDD:131304 15/78 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..580
BRCT 637..706 CDD:237994
FCP1_C 706..960 CDD:286402
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..834
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 854..948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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