DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttm3 and Ctdnep1

DIOPT Version :10

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_080293.1 Gene:Ctdnep1 / 67181 MGIID:1914431 Length:244 Species:Mus musculus


Alignment Length:173 Identity:50/173 - (28%)
Similarity:80/173 - (46%) Gaps:26/173 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LVLEIKDVLVH----------------PDWTYQT-----GWRF--KKRPGVDYFLQQCSRNFEIV 183
            |||::.:.|:|                ||:..:.     ..||  .|||.||:||:..|:.:|:|
Mouse    64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELV 128

  Fly   184 IYTSEQGMTAFPLLDALD-PYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTP 247
            ::|:...:....:.|.|| ....:|.|..|....|..|.:.|:|..::.|||.::::|..|....
Mouse   129 VFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYR 193

  Fly   248 LHPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVL 290
            .||||::.:..|..:..|..|.:|...|.  |.....|||.||
Mouse   194 SHPDNAIPIKSWFSDPSDTALLNLLPMLD--ALRFTADVRSVL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 40/146 (27%)
Ctdnep1NP_080293.1 HIF-SF_euk 61..229 CDD:274055 45/166 (27%)

Return to query results.
Submit another query.