DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm3 and Ctdspl2

DIOPT Version :10

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_997615.1 Gene:Ctdspl2 / 329506 MGIID:1196405 Length:465 Species:Mus musculus


Alignment Length:206 Identity:58/206 - (28%)
Similarity:95/206 - (46%) Gaps:25/206 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 WHTLQYYEKMMEEPQMARLLPNVVPPPYIQ----PPYSLVLEIKDVLVH---------------- 152
            |.....|..:...|.:.....|..|...::    |.:||||::.:.|||                
Mouse   251 WEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVL 315

  Fly   153 -PDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDALDP-YGYIKYRLVRGAT 215
             .|..||...|.  ||....||::.|:.:||:::|:.:.:.|..||:.||| ...:::||.|...
Mouse   316 FQDVIYQVYVRL--RPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHC 378

  Fly   216 DLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAE 280
            ..|:|.:.|:|:.|.||||:.|::|..|........|.:.:..|..:.:|.:|..|..||:.:.|
Mouse   379 VCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVE 443

  Fly   281 HQVNDVREVLR 291
            .. .|||..:|
Mouse   444 LN-EDVRPHIR 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 43/144 (30%)
Ctdspl2NP_997615.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..239
HIF-SF_euk 286..447 CDD:274055 48/163 (29%)
Blue background indicates that the domain is not in the aligned region.

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