DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm3 and scpl-3

DIOPT Version :10

Sequence 1:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001379798.1 Gene:scpl-3 / 172032 WormBaseID:WBGene00021629 Length:287 Species:Caenorhabditis elegans


Alignment Length:254 Identity:73/254 - (28%)
Similarity:111/254 - (43%) Gaps:55/254 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 KLGKPE---------EDHRGPIEDEF------SQLPWFRQYIMRMWHTLQYYEKMMEEPQMARLL 127
            ||..||         |||:||...|:      :.||...:.||.....|         |...|..
 Worm     7 KLVWPEDDYVDESLLEDHQGPARLEYDALVMLANLPPLTEEIMSRCPAL---------PVKTRST 62

  Fly   128 PNVVPPPYIQPPYSLVLEIKDVLVH-----------------PDWTYQTGWRFKKRPGVDYFLQQ 175
            |.          |:|||::.:.|||                 .:.|||...|.  ||.:..||.:
 Worm    63 PE----------YTLVLDLDETLVHCSLTPLDNATMVFPVVFQNITYQVYVRL--RPHLRTFLSR 115

  Fly   176 CSRNFEIVIYTSEQGMTAFPLLDALDP-YGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVV 239
            .::.|||:|:|:.:.:.|..|.|.||| ..:|::||.|.....|.|.:.|:|..|.||.|:.:::
 Worm   116 MAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFREHCVCVFGNYVKDLTILGRDPSKTMIL 180

  Fly   240 DCDPYTTPLHPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFED 298
            |....:.....||.:.:..|..:.:|.:|..|.:||:.|.. ...||||:||:..:..|
 Worm   181 DNAVQSFAYQLDNGIPIESWFHDRNDTELLKLCSFLEAIPT-LGRDVREILRHKYRLRD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm3NP_610130.1 CPDc 138..265 CDD:214729 42/144 (29%)
scpl-3NP_001379798.1 HIF-SF_euk 66..220 CDD:274055 46/155 (30%)

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