Sequence 1: | NP_523615.2 | Gene: | tsh / 35430 | FlyBaseID: | FBgn0003866 | Length: | 954 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036211.1 | Gene: | tshz1 / 369196 | ZFINID: | ZDB-GENE-030820-3 | Length: | 1158 | Species: | Danio rerio |
Alignment Length: | 894 | Identity: | 181/894 - (20%) |
---|---|---|---|
Similarity: | 298/894 - (33%) | Gaps: | 308/894 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 139 KLPPQASPTASSNNSEA-------------LDFRTNLYGRAESAEPPASEGEEEEFDDGANNPLD 190
Fly 191 LSVGTRKRGHE---SEPQLGHIQVKKMFKSDSPPANSVASPSASQLLPGVNPYLAAVAAANIFRA 252
Fly 253 GQFPDWNSKNDLVVDPLEKMSDIVKGGASGMGTKEKMHSSKATTPQAASQPPKSPVQPTPNQNSE 317
Fly 318 SGGGSGGGAAG--SGAVTKA-RHNIW------------QSHWQNKGV------ASSVFRCVWCKQ 361
Fly 362 SFPTLEALTTHMKDSKHCGVNVPPFGNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPS 426
Fly 427 ANVKNAFQYRGDPPTPLPRKLVRGQNVWLGKGVEQAMQILKCMRCGESFRSLGEMTKHMQETQHY 491
Fly 492 TNILSQE---------------------------QSISIKSGNANANS----DAKESHNSLSSE- 524
Fly 525 --------------ESRTLSAVLTCKVCDKAFNSLGDLSNHMAKNNHY----------------- 558
Fly 559 --AEPLLQS----AGARKRPAPK-KREKSLPV-------RKLLEMKGGSGTTQEDHSNEKTSVQG 609
Fly 610 KPGLGPGGGDKNDAALFAERMRQYITGVKAPEEIAKVAAAQLLAKNKSPELVEQKNGGSAKAAGA 674
Fly 675 SSVLSAIEQMFTTSFDTPPRHASLPASSPSNSSTKNTSPVASSI----------LKRLGIDETVD 729
Fly 730 YNKPLIDTNDPYYQH---------YRYTS------------SERSGSECSAE-----ARPRLDAP 768
Fly 769 TPEKQQQGGGHDEESSKPAIK--QEREAESKPVKM-EIKSEFVDEPNEAEETSKMEAAVVNGSAT 830
Fly 831 NNNNNIVERSSPKTPSSAASPQTRLLPPRSPAES---------QRSVTP 870 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tsh | NP_523615.2 | zf-C2H2_2 | <354..>382 | CDD:289522 | 11/27 (41%) |
C2H2 Zn finger | 356..378 | CDD:275371 | 8/21 (38%) | ||
C2H2 Zn finger | 468..490 | CDD:275371 | 11/21 (52%) | ||
C2H2 Zn finger | 535..557 | CDD:275371 | 6/21 (29%) | ||
tshz1 | NP_001036211.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 70..126 | 11/56 (20%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 170..228 | 17/89 (19%) | |||
C2H2 Zn finger | 290..312 | CDD:275371 | 8/21 (38%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 310..341 | 8/81 (10%) | |||
C2H2 Zn finger | 351..373 | CDD:275371 | 11/21 (52%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 405..425 | 5/19 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 516..573 | 17/85 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 656..681 | 6/24 (25%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 693..748 | 11/64 (17%) | |||
homeodomain | 964..1032 | CDD:238039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580298 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 101 | 1.000 | Inparanoid score | I4973 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6467 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12487 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4785 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.070 |