Sequence 1: | NP_523615.2 | Gene: | tsh / 35430 | FlyBaseID: | FBgn0003866 | Length: | 954 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038967676.1 | Gene: | Tshz3 / 308523 | RGDID: | 1306322 | Length: | 1083 | Species: | Rattus norvegicus |
Alignment Length: | 1073 | Identity: | 213/1073 - (19%) |
---|---|---|---|
Similarity: | 340/1073 - (31%) | Gaps: | 356/1073 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 VPQSLPSQPPSMEAYL--HMVAAAAQQYGFPLAAAAAAGAGPRLPLPLANEAAAPFKLPPQASPT 147
Fly 148 A--SSNNSEALDFRTNLYGRAESAEPPASEGEEEEFDDGANNPLDLSVGTRKRGHESEPQLGHIQ 210
Fly 211 VKKMFKSDSPPANSVASPSASQLLPGVNPYLAAVAAANIFRAGQFPDWNSKNDLVVDPLEKMSDI 275
Fly 276 VKGGAS----------GMGTKEKMHSSKATTPQAASQPPKSPVQPTPN---------QNSESGGG 321
Fly 322 SGGGAAGSGAVTKARHNIWQSHWQNKGVASSVFRCVWCKQSFPTLEALTTHMKDSKHCGVNVPPF 386
Fly 387 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANVKNAFQYRGDPPTPLPRKLVRGQ 451
Fly 452 NVWLGKGVEQAMQILKCMRCGESFRSLGEMTKHMQETQHYTNI---------------------- 494
Fly 495 -------------------LSQEQSISIKSGNANANSDAKESHNSLSSE----ESRTLSAVLTCK 536
Fly 537 VCDKAFNSLGDLSNHMAKNNHYAEPLLQSAGARKRPAPKKREKSLP-VRKLLEMKGGS----GTT 596
Fly 597 QEDHSNEKTSVQGKPGLGPGGGDKNDAALFAERMRQYITGVKAPEEIAKV---AAAQLLAKNKSP 658
Fly 659 ELVEQKNGG-----------------------------SAKAA-----------GASSVLSAIEQ 683
Fly 684 MFTTSFDTPPRHASLPASSPSNSSTKNTSPVASS-------ILKRLGIDETVDYNKPLIDTNDPY 741
Fly 742 YQHYRYTSSERSGSECSAEARPRLDAPTPEKQQQGGGHDEESSKPAIKQE--REAESKPVKMEIK 804
Fly 805 SEFV----------------DEPNEAEETSKMEA--AVVN---GSAT--------------NNNN 834
Fly 835 NIVERSSPKTP-------------------------------SSAASPQTRLLPP--RSPAESQR 866
Fly 867 SVT--PKSPASSHKSYDGSSEGTKKFPSDSLNALSSMFDSLGSSGAGANSRAKLAAAAAAGGSES 929
Fly 930 -PENLTAGGNS-------LAALRQFCVKKEKTA 954 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tsh | NP_523615.2 | zf-C2H2_2 | <354..>382 | CDD:289522 | 11/27 (41%) |
C2H2 Zn finger | 356..378 | CDD:275371 | 8/21 (38%) | ||
C2H2 Zn finger | 468..490 | CDD:275371 | 11/21 (52%) | ||
C2H2 Zn finger | 535..557 | CDD:275371 | 6/21 (29%) | ||
Tshz3 | XP_038967676.1 | C2H2 Zn finger | 217..239 | CDD:275371 | 8/21 (38%) |
C2H2 Zn finger | 278..300 | CDD:275371 | 11/21 (52%) | ||
homeodomain | 894..962 | CDD:238039 | 6/27 (22%) | ||
zf-met | 1043..1066 | CDD:403930 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166340504 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 60 | 1.000 | Inparanoid score | I5308 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8976 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12487 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.080 |