Sequence 1: | NP_523615.2 | Gene: | tsh / 35430 | FlyBaseID: | FBgn0003866 | Length: | 954 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004915319.1 | Gene: | tshz1 / 101730769 | XenbaseID: | XB-GENE-13579725 | Length: | 1076 | Species: | Xenopus tropicalis |
Alignment Length: | 953 | Identity: | 189/953 - (19%) |
---|---|---|---|
Similarity: | 315/953 - (33%) | Gaps: | 326/953 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 QASPTASSNNSEALDFRTNLYGR---------AESAEPPASEGEEEEFDDGANNPLDLSVGTRKR 198
Fly 199 GHESEPQLGHIQVKKMFKS------------DSPPANSVASPSASQLLPGVNPYLAAVAAANIFR 251
Fly 252 AGQFPDWNSKNDLVVDPLEKMSDIVKGGASGMGTKEKMHSSKATTPQAASQPPKSPVQPTPNQNS 316
Fly 317 ESGGGSGGGAAGSGAVTK-------------ARHNIWQSHWQNKGVASSV------FRCVWCKQS 362
Fly 363 FPTLEALTTHMKDSKHCGVNVPPFGNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSA 427
Fly 428 NVKNAFQYRGDPPTPLPRKLVRGQNVWLGKGVEQAMQILKCMRCGESFRSLGEMTKHMQETQHYT 492
Fly 493 NILSQE-----------------QSISIK--------SGNANANSDAKES--------------- 517
Fly 518 HNSLS---SEESRTLSAVLTCKVCDKAFNSLGDLSNHMAKNNHY----------AEPLLQSAGAR 569
Fly 570 KR----PAPKKREKSLPVRKLLEMKGGSGTTQEDHSNEKTSVQGKPGLGPGGGDKNDAALFAERM 630
Fly 631 RQYITGVKA----PEEIAKVAAAQLLAKNKSPELVEQKNGGSAKAAGASSVLSAIEQMFTTSFDT 691
Fly 692 -----------PPRHAS--LPAS----SPSNSSTKNTSPVASSILKRLGIDETVDYNKPLIDTND 739
Fly 740 PYYQHYRYTSSERSGSECSAEARPRLDAPTPEKQQQGGGHDEESSKPAIKQEREAESKPVKMEIK 804
Fly 805 SEFVDEPNEAE----------------ETSKMEAAVVNGSATNNNNNIVERSSPK----TPSSA- 848
Fly 849 -----------ASPQTRLLPPR------SPAESQRSVTPKSPASSHKS-----YDGSSEGTKKFP 891
Fly 892 SDSLNALSSMFDSLGSSGAGANSRAKLAAAAAAGGSESPENLT 934 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tsh | NP_523615.2 | zf-C2H2_2 | <354..>382 | CDD:289522 | 10/27 (37%) |
C2H2 Zn finger | 356..378 | CDD:275371 | 8/21 (38%) | ||
C2H2 Zn finger | 468..490 | CDD:275371 | 11/21 (52%) | ||
C2H2 Zn finger | 535..557 | CDD:275371 | 6/21 (29%) | ||
tshz1 | XP_004915319.1 | C2H2 Zn finger | 250..272 | CDD:275371 | 8/31 (26%) |
C2H2 Zn finger | 311..333 | CDD:275371 | 11/21 (52%) | ||
homeodomain | 885..953 | CDD:238039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9401 | |
Panther | 1 | 1.100 | - | - | O | PTHR12487 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.100 |