DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and Arfgef2

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001078964.1 Gene:Arfgef2 / 99371 MGIID:2139354 Length:1792 Species:Mus musculus


Alignment Length:259 Identity:103/259 - (39%)
Similarity:145/259 - (55%) Gaps:23/259 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 YINTEQSDNLVILRRPSKQIKD-------ELCEVVS---------EMEALDVPEDCKHSNKDKQ- 398
            |:|......|...|.|.:::.|       ..|.|.|         :....|.||..:...:.|: 
Mouse   589 YVNPNHQATLGQERLPDQEMGDGKGLDMARRCSVTSVESTVSSGTQTAIQDDPEQFEVIKQQKEI 653

  Fly   399 MSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAF 463
            :..|.:.||..||:||::|.|..:|....:|:|.||::.|.|:.|.:|::||:...||::|:.|:
Mouse   654 IEHGIELFNKKPKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKEVMYAY 718

  Fly   464 VALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRY--CQLNPDIFTNTDTCYVLSFAI 526
            |...||.....|.|||.||..||||||||||||:||.||.||  |.....:|.:.||.|||:::|
Mouse   719 VDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECNQGQTLFASADTAYVLAYSI 783

  Fly   527 IMLNTSLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHT 590
            |||.|.||:|.||:|.|.:|:|.||||||:..|||...|.|:|:.|  |..||...:..:  ||
Mouse   784 IMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEI--EGKKIAMKETKE--HT 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 87/184 (47%)
PH_GRP1-like 592..710 CDD:269954
Arfgef2NP_001078964.1 DCB, DCB:DCB domain and DCB:HUS domain interaction. /evidence=ECO:0000250 2..224
PLN03076 11..1718 CDD:215560 103/259 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..294
HUS, DCB:HUS domain interaction. /evidence=ECO:0000250 515..535
Blue background indicates that the domain is not in the aligned region.

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