DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and SEC7

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_010454.3 Gene:SEC7 / 851748 SGDID:S000002577 Length:2009 Species:Saccharomyces cerevisiae


Alignment Length:429 Identity:131/429 - (30%)
Similarity:203/429 - (47%) Gaps:75/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SDVTTKVTE--------VQRLPCDEPNTELISKRTEY---------KHTTITTTTRTLIVSRPVE 237
            |::||..::        :||: |::|.| |:.....|         ...|:...|| |.::| ||
Yeast   620 SELTTSTSQQKRYFLSVIQRI-CNDPRT-LVEFYLNYDCNPGMPNVMEITVDYLTR-LALTR-VE 680

  Fly   238 LLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDDMRFIDD- 301
            :          .::.|......:.:.|...|       |.:....:.::|...|.:..:..:.. 
Yeast   681 I----------TQTQRSYYDEQISKSLSTYN-------FSQLPLLTSSNLSSSPDVGQVNLLFPL 728

  Fly   302 -----------------SSNSQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRMLLDR 349
                             |.:|.:....|.|.|..||...  |...|.|:..:|:|....     |
Yeast   729 DFALKMVSLNCIVSVLRSLSSWAHKALNPNTHTANKVLL--NTTSSARQESRSSLSNDV-----R 786

  Fly   350 NYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHSN-KDKQMSIGR--KKFNMDPK 411
            :.|.|...|     .:|:  .:||....:|. :.:|..:..:..| |.::.::..  ..||..||
Yeast   787 SSIMTSNDD-----FKPT--YEDEESRSLSS-QNIDADDPTQFENLKLRKTALSECIAIFNNKPK 843

  Fly   412 KGIEYLVENRLLRHD-PQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILV 475
            |.|..|::...|:.| |..:|.:|.:.|||:..|:||||||.:|.|..::.|||...|||.:.:|
Yeast   844 KAIPVLIKKGFLKDDSPISIAKWLLETEGLDMAAVGDYLGEGDDKNIAIMHAFVDEFDFTGMSIV 908

  Fly   476 QALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKD 540
            .|||.||.|||||||.|||||.|..||:|:...||.:|:..||.||||:::|||||.||:..:|:
Yeast   909 DALRSFLQSFRLPGEGQKIDRFMLKFAERFVDQNPGVFSKADTAYVLSYSLIMLNTDLHSSQIKN 973

  Fly   541 KPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKI 579
            |.::.:|:..|.||:||.||||..||.|:..|.....|:
Yeast   974 KMSLQEFLENNEGIDNGRDLPRDFLEGLFNEIANNEIKL 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 85/184 (46%)
PH_GRP1-like 592..710 CDD:269954
SEC7NP_010454.3 PLN03076 272..1935 CDD:215560 131/429 (31%)
Blue background indicates that the domain is not in the aligned region.

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