DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and AT4G35380

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_195264.2 Gene:AT4G35380 / 829691 AraportID:AT4G35380 Length:1706 Species:Arabidopsis thaliana


Alignment Length:638 Identity:168/638 - (26%)
Similarity:258/638 - (40%) Gaps:146/638 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GLGGSESVGRKQPLQRSCLDLSTTRVGCDGCVSLEFFQSESPESRRSNSTFYVNTQNVSSAVFKD 94
            ||.|:..:..|..|.:..|.:              |.:||......|..|.|||    ....|.|
plant   173 GLSGTTQICAKSVLAQMMLVI--------------FTRSEEDSLDVSVKTIYVN----ELLTFTD 219

  Fly    95 NRQPLLERGSGSDSSPSSVCVRCSCNSITKSGDRNETPTMATPKSDIKIALKPPP-----KPRSP 154
            .        |.::.|....| :...|.:..:|..:..|    |...|:|.|:.|.     .|.||
plant   220 K--------SVNEGSSVYFC-QGFVNEVMAAGQGSPLP----PPDVIQILLQNPETETVMTPDSP 271

  Fly   155 SMAPYTS-----VATYNITKLAPD------SPPPASPTLSTQTVNCSDV----TTKVTEVQRLPC 204
            |...|.:     ..|.:::|:..|      :....|...|::..|...:    .|...|:.::..
plant   272 SFRGYVANGEGDSETGDMSKVRQDAFLLFKNLCKLSMRFSSKENNDDQIMVRGKTLSLELLKVII 336

  Fly   205 D------EPNTELISKRTEY------KHTTIT----------------TTTRT-----------L 230
            |      ..|...|:...:|      |::.::                :..|:           :
plant   337 DNGGSVWRTNESFINAVKQYLCLSLLKNSAVSIMSIFQLQCAIFMSLLSKLRSVLKAEIGIFFPM 401

  Fly   231 IVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDD 295
            ||.|.:|.:|          .|...:..::..:||                  |.|..|...:|.
plant   402 IVLRVLENVL----------QPSYLQKMTVLNLLD------------------KMSQDPQLMVDI 438

  Fly   296 MRFIDDSSNSQSESERNSN-IHKT--NKYTSKNNNNDSKRESQQSNLCESCRMLLDR---NYINT 354
            ....|....|.:..||..| :.||  ...|..:......::|...|....|.:.|.:   |:::.
plant   439 FVNYDCDVESSNILERIVNGLLKTALGPPTGSSTTLSPAQDSTFRNDSVKCLVNLAKAMGNWMDQ 503

  Fly   355 EQSDNLVILRRPSK--QIKDELCEVVSEMEALDVPEDCKH----SNKDK--------------QM 399
            :...|..:..:.|:  ...|.....:||:|.  ...||..    ||.:.              ::
plant   504 QLKVNETVWPKGSQVYASMDSNASQISELEG--TISDCDSQPDTSNPEAYDASMLEQRRAYKIEL 566

  Fly   400 SIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFV 464
            ..|...||..|.||:|:|:..:.:...|::||.||.|..|||.|.|||||||:::....|:.|:|
plant   567 QKGISLFNRKPSKGVEFLISTKKIGSSPEEVASFLMKTAGLNGTVIGDYLGERDELPLKVMHAYV 631

  Fly   465 ALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIML 529
            ...:|.....|:|:|.||..||||||||||||:||.||:.|.:.||..||:.||.|||::::|||
plant   632 DSFNFEKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFAEHYWKCNPGSFTSADTAYVLAYSVIML 696

  Fly   530 NTSLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQD 582
            ||..||..||||.|...|:..||||::|.|||...|.|||:.:..|..::..|
plant   697 NTDAHNNMVKDKMTKADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEIRMNSD 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 86/193 (45%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
AT4G35380NP_195264.2 PLN03076 11..1705 CDD:215560 168/638 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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