DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and ATMIN7

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_189916.4 Gene:ATMIN7 / 823405 AraportID:AT3G43300 Length:1758 Species:Arabidopsis thaliana


Alignment Length:705 Identity:173/705 - (24%)
Similarity:259/705 - (36%) Gaps:211/705 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PGL-GGSESVGRKQPLQRSCLDLSTTRVGCDGCVSLEFFQSESPESRRSNSTFYVNTQNVSSAVF 92
            ||| ||..|......|...|           .||     .:.||:| .......|....|:|..|
plant   143 PGLDGGKNSAPFTDILNMVC-----------SCV-----DNSSPDS-TVLQVLKVLLTAVASGKF 190

  Fly    93 KDNRQPLLERGSGSDSSPSSVCVRCSCNSITKSGDRNETPTMATPKSDIKIALKPPPKPRSPSMA 157
            |.:.:|||        ....||...:.||                ||.|.         ::.|.|
plant   191 KVHGEPLL--------GVIRVCYNIALNS----------------KSPIN---------QATSKA 222

  Fly   158 PYTSVATYNITKLAPDSPPPASPTLSTQTVNCSDVTTKVTEVQRLPCDEPNTELISKRTEYKHTT 222
            ..|.:.:....::..|....:|.....:.|:....:.|..|:.....:|....|....|:.|.||
plant   223 MLTQMISIVFRRMETDIVSASSTVSQEEHVSGDTSSPKNEEITAADENEKEMTLGDALTQAKDTT 287

  Fly   223 ITTT--TRTLI-----------VSRPVELLLNENGEIIARRSPRKSRSNSLGR------------ 262
            :.:.  ..||:           :.:.|.|   |:|:.|.|..  :..|.|:|:            
plant   288 LASVEELHTLVGGADIKGLEAALDKAVHL---EDGKKIKRGI--ELESMSIGQRDALLVFRTLCK 347

  Fly   263 --MLDVQNEIGT-----------GGLFMEADPCSKNSLPPPPYIDDMR----------------- 297
              |.:..:|:.|           |.|...:...:||.    .:||.::                 
plant   348 MGMKEDSDEVTTKTRILSLELLQGMLEGVSHSFTKNF----HFIDSVKAYLSYALLRASVSQSSV 408

  Fly   298 -------------------------------FIDDSSNSQSESERNSNIHKTNKYTSKNNNNDSK 331
                                           |.|..|:||.|......|.......:....||.|
plant   409 IFQYASGIFSVLLLRFRDSLKVSMDCYLSPYFSDPKSHSQGEIGIFFPIIVLRSLDNSECPNDQK 473

  Fly   332 RE--SQQSNLCESCRMLLDRNYIN------------------------TEQSDNLVILRRPSKQI 370
            ..  .....:|:..:||:| .|:|                        ::.:|....:...:..:
plant   474 MGVLRMLEKVCKDPQMLVD-VYVNYDCDLEAPNLFERMVTTLSKIAQGSQSADPNPAMASQTASV 537

  Fly   371 KDELCE-VVSEMEAL----------------------------------DVPEDCKHSNKDKQ-M 399
            |....: :|:.:::|                                  |||.:.:.:...|. |
plant   538 KGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKSREDVPSNFEKAKAHKSTM 602

  Fly   400 SIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFV 464
            .....:||.:..||:|||:.|:|:..:|..||.||.....|:|..||||||:..:|...|:.|:|
plant   603 EAAISEFNRNSVKGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEFPLAVMHAYV 667

  Fly   465 ALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIML 529
            ....|:.:....|:|:||..||||||||||||:||.||:|||..||.:|.|.||.|||::|:|||
plant   668 DSMKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIML 732

  Fly   530 NTSLHNPSVKDKPTVDQFISMNRGINNGGD-LPRGLLESLYESIRTEPFKIPQDD 583
            ||..|||.|..|.:...|..|| ..|:..| .|..|||.:|:||..|..|:..||
plant   733 NTDAHNPMVWPKMSKSDFTRMN-ATNDPEDCAPTELLEEIYDSIVQEEIKLKDDD 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 85/183 (46%)
PH_GRP1-like 592..710 CDD:269954
ATMIN7NP_189916.4 PLN03076 24..1758 CDD:215560 173/705 (25%)
Blue background indicates that the domain is not in the aligned region.

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