DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and iqsec2b

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_005167294.1 Gene:iqsec2b / 797187 ZFINID:ZDB-GENE-081105-73 Length:1581 Species:Danio rerio


Alignment Length:945 Identity:201/945 - (21%)
Similarity:328/945 - (34%) Gaps:350/945 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PSISNWFSSLRRQP-----------KNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVGCDGCVS 62
            |:...|....|.||           :||:|.   ..|:|......||...:::...:.|      
Zfish   196 PASLAWAQRTRNQPASLALRKQEEEENKRCK---ALSDSYELSTDLQDKKVEMLEKKYG------ 251

  Fly    63 LEFFQSESPESRRSNSTFYVNTQNVSSAVFKDNRQPLLERGSGSDSSPSSVCVRCSCNSITKSGD 127
             .:|     .|||:     ..|...:...::.|:.....|.|.|:|..:...:..:........|
Zfish   252 -GYF-----VSRRA-----ARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMRLQYSFDD 305

  Fly   128 RNETPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNITKLAPDSPPPASPTLSTQTVNCSDV 192
            |:                   |:|.:|:...:           :|...||.|||.:|        
Zfish   306 RH-------------------PQPPNPTHYSH-----------SPGMGPPHSPTSTT-------- 332

  Fly   193 TTKVTEVQRLPCDEPNTELISKRTEYK--HTTITTTTRTL-------IVSRP-----------VE 237
                         ||:    |.|.||.  ..|.:...::|       :..||           |.
Zfish   333 -------------EPS----SPRPEYTQLEDTFSKQVKSLADSIDDALTCRPRRDDSQEGIGDVS 380

  Fly   238 LLLNENGEIIARRSPRKSRSN-SLGRMLDVQNEIGTGGLFMEAD-----------------PCSK 284
            .::::.||.|     ..|.|: ||.|.|..::..|||||.|..|                 |.|.
Zfish   381 GVVDDFGECI-----WSSNSHASLRRGLADRDRGGTGGLSMHEDSTATSYSDVTLYMDDGLPSSP 440

  Fly   285 NSLPPPPYIDDMRF----------IDDSSNSQ----SESERNSNIHKTNKY-------------- 321
            .||...|...|..|          .:||.:::    |.|.|::...:...|              
Zfish   441 LSLDRAPSSTDTEFWGGVGSGVGGREDSRDTEGGGSSNSRRSTPCTECRDYRLRGGHLPLLTIEP 505

  Fly   322 ----------------------------------TSKNNNN------------------------ 328
                                              |.|:|.|                        
Zfish   506 PSDSSVDMSDRSDRGSLSRQLVYEQDSAGGSPQGTLKHNPNARSQSSTTAQGQTRPASRSIPSHI 570

  Fly   329 -----------------------DSKRESQQ----------------SNLCESCRMLLDRNYINT 354
                                   .|....||                ..|.:.|....|.:.:|:
Zfish   571 PHHMAHHHHHHHHHHHHQYPDTPSSSSSPQQPPTTPLSSSSSAPLPPGGLEQQCCSDGDNDSLNS 635

  Fly   355 EQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHS------NKD----KQMSIGRKKFNMD 409
            ..:.|..|........:|.|.|.:..:.......:.:|:      |.|    :|..||...||..
Zfish   636 TTNSNETINCSSGSSSRDSLREPLPPLGKQTYQRESRHNWDSPAFNNDVVQRRQYRIGLNLFNKK 700

  Fly   410 PKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEK-NDFNEDVLKAFVALHDFTNLI 473
            |:|||:||:|...:...|..:|.|:.:.:||::..||::||.: ..||:|||...|...||:.:.
Zfish   701 PEKGIQYLIEKGFVSDTPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDFSGMD 765

  Fly   474 LVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDI---FTNTDTCYVLSFAIIMLNTSLHN 535
            |..|||:|....::.|||||::|::|.|:||||..||.:   |.|.||.::|:||||:|||.:::
Zfish   766 LDDALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPALVRQFQNPDTIFILAFAIILLNTDMYS 830

  Fly   536 PSVK--DKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDL----------- 587
            |::|  .|..:|.||...||::||.::||.||..:|:.|:....:...|..:.:           
Zfish   831 PNIKAERKMKLDDFIKNLRGVDNGQEIPRDLLVGIYQRIQKWELRTNDDHVSQVQAVERVIVGKK 895

  Fly   588 ---------------MHTFFNPDKEGWLWKQGGRYKSWKRRWFILND-------------NCLYY 624
                           :|...:|::.    ::.|.:   :|..|:.||             :..|.
Zfish   896 PVLSLPHRRLVCCCQLHEVPDPNRP----QRSGVH---QREVFLFNDLLVVTKIFQKKKTSVTYS 953

  Fly   625 FEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFAT--GGADIIKACKTDSEGKVVEGKHTVYR 687
            |        |...||..:.|....:...||...|.:.  ||           |.||:    .|: 
Zfish   954 F--------RQSFPLVEMQVHMFQNSYYPHGVRLTSAIPGG-----------ERKVL----IVF- 994

  Fly   688 MSAATEEDQQEWIKRLTQSISHNPFYDILVQRKKK 722
             :|.:::|:..::..|.:||:.       ||..:|
Zfish   995 -TAPSQQDRTRFVSDLRESIAE-------VQEMEK 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 76/185 (41%)
PH_GRP1-like 592..710 CDD:269954 26/132 (20%)
PH 596..708 CDD:278594 24/126 (19%)
iqsec2bXP_005167294.1 Sec7 686..871 CDD:279680 76/184 (41%)
IQ_SEC7_PH 899..1026 CDD:293062 30/162 (19%)
PH 926..1014 CDD:278594 23/115 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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