DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and Iqsec1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_038964676.1 Gene:Iqsec1 / 686590 RGDID:1596313 Length:1203 Species:Rattus norvegicus


Alignment Length:674 Identity:174/674 - (25%)
Similarity:276/674 - (40%) Gaps:135/674 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPSISNWFSSLRRQPKNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVG-------CDGCVSLE 64
            :||.:.:..|.||:|.:.:........|||......||...:::...:.|       ....:...
  Rat   169 RRPRLQHSTSVLRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLVTRHAARTIQTA 233

  Fly    65 FFQ--------------SESPESRR---SNSTF---YVNTQNVSSAVFKDNRQPLLERGSGSDSS 109
            |.|              ||:..|||   ||...   :...:.|.|:.|:..:..:.     :|.|
  Rat   234 FRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVT-----NDGS 293

  Fly   110 PSSVCVRCSCNSITKSGDRNETPT--MATPKSDIKIALKPPPKPRSPSM-------------APY 159
            .....|...|..::....::..|:  .|...::::.|.....|..:.|:             .|.
  Rat   294 QLGALVPSECGDLSDPALKSPAPSSDFADAITELEDAFSRQVKSLAESIDDALNCRSLHSEEVPA 358

  Fly   160 TSVATYNITKLAPDSPPPASPTLSTQTVNCSDVTTKVTEVQRLP-------CDEPNTELISKR-- 215
            :..|....|:..|.........|...|.:.||||..:.|.:..|       .|.|::.....|  
  Rat   359 SDTARARDTEPKPGLHGMDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQAGDRPSSTESDLRLR 423

  Fly   216 -------------TEYKHTTITTTTRTLIVSRPVELLLNENGEIIARRSP---------RKSRSN 258
                         .|.|..|.|:...|..:.||...|..|:..::....|         |..|| 
  Rat   424 SGGAAQDYWALAHKEDKADTDTSCRSTPSLERPEPRLRVEHLPLLTIEPPSDSSVELSDRSDRS- 487

  Fly   259 SLGRMLDVQNEIG----------TGGLFMEADPCSKNSLP---------PPPYIDDMRFIDDSSN 304
            ||.|....:..:|          .||        ....||         ||..::....|:.|:|
  Rat   488 SLKRQSAYERSLGGQQGSPKHGPHGG--------PPKGLPREEPELRPRPPRPLESHLAINGSAN 544

  Fly   305 SQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRMLLDRNYINTEQSDNLVILRRPSKQ 369
            .||:||.:.:....:...|.:|:||:...|.:|:..:|.|          ||:        .|||
  Rat   545 RQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLR----------EQT--------LSKQ 591

  Fly   370 IKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFL 434
            ...:     ....:.|.|.......:.:...||...||..|:|||:||:|...:...|..|||||
  Rat   592 TYHK-----ETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVPDTPVGVAHFL 651

  Fly   435 YKGEGLNKTAIGDYLGEK-NDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMM 498
            .:.:||::..||::||.: ..||.|||...|...||:.:.|.:|||:|....|:.|||||::|::
  Rat   652 LQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLI 716

  Fly   499 ETFAQRYCQLNPDI---FTNTDTCYVLSFAIIMLNTSLHNPSVKD--KPTVDQFISMNRGINNGG 558
            |.|:||||..||.:   |.|.||.::|:||||:|||.:::|:||.  |..::.|:...||:::|.
  Rat   717 EAFSQRYCVCNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGE 781

  Fly   559 DLPRGLLESLYESIRTEPFKIPQD 582
            |:||..|..:||.||....|..:|
  Rat   782 DIPRETLIGIYERIRKRELKTNED 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 79/185 (43%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
Iqsec1XP_038964676.1 Sec7 612..800 CDD:396096 79/187 (42%)
IQ_SEC7_PH 832..967 CDD:406773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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