DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and RASA1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_002881.1 Gene:RASA1 / 5921 HGNCID:9871 Length:1047 Species:Homo sapiens


Alignment Length:515 Identity:112/515 - (21%)
Similarity:184/515 - (35%) Gaps:151/515 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 IGTGGLFMEADPCSKNSLPPPPY----------IDDMRFIDDSSNSQSESERNSNIHKTNK-YTS 323
            :|.||.|        ..||||||          :|:...:|.....:.|.........||: |..
Human   128 LGPGGGF--------PPLPPPPYLPPLGAGLGTVDEGDSLDGPEYEEEEVAIPLTAPPTNQWYHG 184

  Fly   324 KNNNNDSKRESQQSN------LCESCR--------MLLDRNYIN----TEQSDNLVILRRPSKQI 370
            |.:...::...:|:.      :.||.|        .|...|.:|    .....:..|..|....:
Human   185 KLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAMCGDYYIGGRRFSSL 249

  Fly   371 KDEL-------CEVVSEMEALDV--PEDCKHSNKDKQMSIGRKKFNMDP---KKGIEYLVENRL- 422
            .|.:       |.:..|.....|  ||..:...:.:.:....|..:.|.   .||..::|.|.| 
Human   250 SDLIGYYSHVSCLLKGEKLLYPVAPPEPVEDRRRVRAILPYTKVPDTDEISFLKGDMFIVHNELE 314

  Fly   423 --------LRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALR 479
                    ||.|.|          ||....:.:.:|.:.|.:|..                    
Human   315 DGWMWVTNLRTDEQ----------GLIVEDLVEEVGREEDPHEGK-------------------- 349

  Fly   480 QFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDKPTV 544
              :| |......|:...::.|..| .|........||...|.|.|   ..|.::....:...|. 
Human   350 --IW-FHGKISKQEAYNLLMTVGQ-VCSFLVRPSDNTPGDYSLYF---RTNENIQRFKICPTPN- 406

  Fly   545 DQFISMNRGINNGGDL-----PRGLLESLYESIRTEPFKIP-QD---------DGNDLMHT---- 590
            :||:...|..|:.||:     ...::|..|   ..||  :| ||         ||.::.:|    
Human   407 NQFMMGGRYYNSIGDIIDHYRKEQIVEGYY---LKEP--VPMQDQEQVLNDTVDGKEIYNTIRRK 466

  Fly   591 -----FFNPDKEGWLWKQGGRYKSWKRRWFIL--NDNCLYYFEYTTDK---EPRGIIPLENISVR 645
                 :.|..|:|:|.|: |:.|.||..:|||  :|..|.|||  ::|   :|:|:|.|...||.
Human   467 TKDAFYKNIVKKGYLLKK-GKGKRWKNLYFILEGSDAQLIYFE--SEKRATKPKGLIDLSVCSVY 528

  Fly   646 EIHDR--SKPHCFELFATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRL 703
            .:||.  .:|:||::.....::                :|.::..:..|.|..::|:|.|
Human   529 VVHDSLFGRPNCFQIVVQHFSE----------------EHYIFYFAGETPEQAEDWMKGL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 38/196 (19%)
PH_GRP1-like 592..710 CDD:269954 35/119 (29%)
PH 596..708 CDD:278594 34/115 (30%)
RASA1NP_002881.1 SH2_Nterm_RasGAP 161..264 CDD:198216 16/102 (16%)
SH3_RasGAP 281..339 CDD:212722 13/67 (19%)
SH2_Cterm_RasGAP 350..426 CDD:198217 19/81 (23%)
PH_RASA1 489..576 CDD:270080 28/102 (27%)
C2_Ras_p21A1 591..716 CDD:176045
RasGAP_p120GAP 714..1045 CDD:213340
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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