DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and gbf1

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_009305378.2 Gene:gbf1 / 566350 ZFINID:ZDB-GENE-081107-54 Length:1862 Species:Danio rerio


Alignment Length:754 Identity:166/754 - (22%)
Similarity:277/754 - (36%) Gaps:244/754 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SNWFSSLR--RQPKNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVGCDGCVSLEFFQSESPESR 74
            |.|....|  |.|::...||.       |:..|.|.|.|                          
Zfish   237 SKWKKQKRSPRPPRHMVRSPS-------GQMDPAQSSTL-------------------------- 268

  Fly    75 RSNSTFYVNTQNVSSAVFKDNRQPLLERGS-------GSDSSPSSVCVRCSCNSITKSG-DRNET 131
                     |.|:|..|      |.:|:.|       ||||:.||:     .:..|.|| |....
Zfish   269 ---------TNNLSGGV------PFIEQHSGGSSTFPGSDSAASSI-----SSPTTDSGLDTGSK 313

  Fly   132 PTMATPKSDIKIALKPPPKPRSPSMAP--------------YTSVATYNITKLAPD--------- 173
            .|.....:|:.........|.:||..|              ..|.:..:|.::..|         
Zfish   314 TTSKEDLTDLDQNSSTATTPITPSAEPGRLESQSESRGVERAQSASVESIPEVLEDRDLLADQSD 378

  Fly   174 ----------SPPPASPTLSTQTVNCSDVTTKVTEVQRL---------PCDEPNT--------EL 211
                      :|.....|.|||....:.:...:..::.|         |.|..|:        :|
Zfish   379 SASIHDMDYVNPRGVRFTQSTQKEGAALIPYGLPCLRELFRFLISLTNPHDRHNSDVMMHMGLQL 443

  Fly   212 ISKRTEYKH----------------------------TTITTTTRTLI---------VSRPVELL 239
            ::...|..|                            ...|.:.|...         :...:|:.
Zfish   444 LNVALEAAHIAPYQSLLGLVKDELCRHLIQLLGVDRMNLYTASIRVCFLLFESMREHLKFQLEMY 508

  Fly   240 LNENGEIIARRSPR---KSRSNSLGRMLDVQN--------------EIGTGGLFMEADP-CSKNS 286
            |.:..:||...:|:   :.:..:|..::.:..              :.....||.:... .|||:
Zfish   509 LKKLMDIITSENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDFYCSNLFEDLTKLLSKNA 573

  Fly   287 LPPPPY--------IDDMRFIDDSS---------NSQSESERN----------SNIHKTNKYTSK 324
            .|....        ::.:..:.||:         ||.::.|::          |.|..:...|.|
Zfish   574 FPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSATQQEQSESTTVGDSSVSTITDSPAETGK 638

  Fly   325 NNNNDSKRESQQSNLCESC----------RMLLDRNYINTEQSD--NLVILRRP---SKQIKD-- 372
            .:.:.:.:.|..|....||          :|.|.|.  :.|::|  ...|.::|   |..:.|  
Zfish   639 PHPSSNGQNSVVSETRASCPPTSGHLMAEKMRLGRQ--DQEETDTGEKKISKKPHRFSSYLPDSQ 701

  Fly   373 ELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRH--DPQDVAHFLY 435
            ||.|:               .||.|.:..|.::||..|||||:.|.|..||..  |..:||.:|.
Zfish   702 ELLEI---------------KNKKKLLITGTEQFNQKPKKGIQTLQEKGLLSSPMDNNEVAQWLR 751

  Fly   436 KGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMET 500
            :...|:|..||:::.::.  |.|:|.:||....|..|.:.:|||.:|.:|||||||..|.|::||
Zfish   752 ENPRLDKKMIGEFISDRR--NTDLLDSFVNTFTFQGLRIDEALRLYLEAFRLPGEAPVIHRLLET 814

  Fly   501 FAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDK---PTVDQFISMNRGINNGGDLPR 562
            |...:.::|.:.|...|..:.|::|:|||||..||.:|:.:   .|::||....:|:|.|.|..:
Zfish   815 FTDNWHKVNGNPFQTNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTLEQFKKNLKGVNGGNDFDQ 879

  Fly   563 GLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLW 601
            .:||.:|.:|:.|...:| |:...|:       ||.::|
Zfish   880 DMLEDIYNAIKNEEIVMP-DEQTGLV-------KENYVW 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 70/186 (38%)
PH_GRP1-like 592..710 CDD:269954 3/10 (30%)
gbf1XP_009305378.2 None

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