DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and PSD

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001257894.1 Gene:PSD / 5662 HGNCID:9507 Length:1024 Species:Homo sapiens


Alignment Length:830 Identity:177/830 - (21%)
Similarity:280/830 - (33%) Gaps:284/830 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLHQKRPSISNW---FSSL------RRQPKNKKCS-PGLGGSE----SVGRKQPLQRSCLDLSTT 53
            |.|.:|.:.:.|   :.||      .:.|:....| ||:|..:    :|||......:  ||.|.
Human   229 SSHAQRIARAKWEFFYGSLDPPSSGAKPPEQAPPSPPGVGSRQGSGVAVGRAAKYSET--DLDTV 291

  Fly    54 RVGCDGCVSLEFFQSESPESRRSNSTFYVNTQNVSSAVFKDNRQPLLER---GSGSDSSPSSVCV 115
            .:.|                       |..|         |..:.|.||   .|..:|.|||   
Human   292 PLRC-----------------------YRET---------DIDEVLAEREEADSAIESQPSS--- 321

  Fly   116 RCSCNSITKSGDRNETPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNI------------- 167
                         ...|..|.|         |.|:| .|...|:.|:.:.|.             
Human   322 -------------EGPPGTAYP---------PAPRP-GPLPGPHPSLGSGNEDEDDDEAGGEEDV 363

  Fly   168 --------------TKLAPDSPPPASPTLS-----TQTVNCSDVTTKVTEVQRLPCDEPNTELIS 213
                          :::...||.|..|..|     ..:.:|  |...:.|..|           :
Human   364 DDEVFEASEGARPGSRMPLKSPVPFLPGTSPSADGPDSFSC--VFEAILESHR-----------A 415

  Fly   214 KRTEYKHTTITTTTRTLIVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFME 278
            |.|.|      |:..:|              |.:|...|.:|..                 ...|
Human   416 KGTSY------TSLASL--------------EALASPGPTQSPF-----------------FTFE 443

  Fly   279 ADPCSKNSLPPPPYIDDMRFIDDSSNSQSESERNSNIHKTNKYTSKNNNNDSKRES------QQS 337
            ..|......|.||....:..::..|.:.|.::        ..:|.:....:::..:      :..
Human   444 LPPQPPAPRPDPPAPAPLAPLEPDSGTSSAAD--------GPWTQRGEEEEAEARAKLAPGREPP 500

  Fly   338 NLCESCRMLLDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEA-LDVPEDCKHSNKDKQMSI 401
            :.|.|              .|:|.:...|... :..|.::||:.:: ||..|.....:.| .:|.
Human   501 SPCHS--------------EDSLGLGAAPLGS-EPPLSQLVSDSDSELDSTERLALGSTD-TLSN 549

  Fly   402 GRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVAL 466
            |:       |..:|          ..|.:|..||:.:|..|..:..:||:.|||::.|...::..
Human   550 GQ-------KADLE----------AAQRLAKRLYRLDGFRKADVARHLGKNNDFSKLVAGEYLKF 597

  Fly   467 HDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNT 531
            ..||.:.|.||||.||....|.||.|:.:|::..|:|||.|.||:..::.|..:.|:.|:::|||
Human   598 FVFTGMTLDQALRVFLKELALMGETQERERVLAHFSQRYFQCNPEALSSEDGAHTLTCALMLLNT 662

  Fly   532 SLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTF----- 591
            .||..::..:.|...||....|:|:|||.||.||::||.||:.|..:...|: .:|..:.     
Human   663 DLHGHNIGKRMTCGDFIGNLEGLNDGGDFPRELLKALYSSIKNEKLQWAIDE-EELRRSLSELAD 726

  Fly   592 ----------------------FNPDKEGWLWKQG-----------------GRYKSWKRRWFIL 617
                                  ..|:....::|.|                 |: :.||....||
Human   727 PNPKVIKRISGGSGSGSSPFLDLTPEPGAAVYKHGALVRKVHADPDCRKTPRGK-RGWKSFHGIL 790

  Fly   618 NDNCLYY--FEYTTDK-----EPRGIIPLENISVREIHDRSK-PHCFELFATGGADIIKACKTDS 674
            ....||.  .||...|     |.:..|.:.:.......|.|| ||.|.|..   ||         
Human   791 KGMILYLQKEEYKPGKALSETELKNAISIHHALATRASDYSKRPHVFYLRT---AD--------- 843

  Fly   675 EGKVVEGKHTVYRMSAATEEDQQEWIKRL---TQSISHNPFYDILVQRKK 721
                    ..|:...|.:.|..|.||.|:   ....|..||...:..:||
Human   844 --------WRVFLFQAPSLEQMQSWITRINVVAAMFSAPPFPAAVSSQKK 885

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 62/179 (35%)
PH_GRP1-like 592..710 CDD:269954 32/145 (22%)
PH 596..708 CDD:278594 30/139 (22%)
PSDNP_001257894.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..98