DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and acap2a

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_005163306.1 Gene:acap2a / 564814 ZFINID:ZDB-GENE-081104-34 Length:824 Species:Danio rerio


Alignment Length:448 Identity:82/448 - (18%)
Similarity:155/448 - (34%) Gaps:128/448 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 DDMRF---IDDSSNSQSESERNSNIHKTNK-----------YTSKNNN----------NDSKRES 334
            |..||   |:|......|.|  |.:.|..|           |...|..          ..::.|.
Zfish    13 DSPRFRATIEDVEEDFGELE--SKLDKLVKLCIGMIDAGRVYNQANKQFVNGIRDLALQSTRDEV 75

  Fly   335 QQSNLCESCRMLLDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHSNKDKQM 399
            ..|:|......|.:.|..:|      ::..:..:.|:.:|...|.|    |:          ::.
Zfish    76 IGSSLAAFSETLQEMNNYHT------ILFDQAQRSIRSQLQTFVKE----DL----------RKF 120

  Fly   400 SIGRKKFNMDPKKGIEYLVEN----RLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNE--- 457
            ...:|:|:...::....||:|    |...|:.::..:.|...:...:....||:.:.|....   
Zfish   121 KDAKKQFDKVSEEKEVALVKNAQVPRNKLHEVEEATNILTTTQKFFRNIALDYVLQINVLQSKRR 185

  Fly   458 -DVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYV 521
             ::||:.:|..:.......|....|          .::..:|:..:.:..||            |
Zfish   186 LEILKSMLAYMNANLTFFNQGHDLF----------SQLQPLMKQLSGQLDQL------------V 228

  Fly   522 LSFAIIMLNTSLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGND 586
            :..|....:....:.|::.|..:..|.:                    |..:.| :.|..|:|..
Zfish   229 VDSAKEKRDMEQKHSSIQQKAALQDFST--------------------EDSKLE-YNIDTDNGIA 272

  Fly   587 LMHTFFNPDKEGWLWKQGGR-YKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDR 650
            :         ||:|:|:... :|:|.||||.:.::.|.|.:...|.....:..|...:|:...|.
Zfish   273 M---------EGYLFKRASNAFKTWNRRWFSIQNSQLVYQKRFRDNPTVVVEDLRLCTVKHCEDV 328

  Fly   651 SKPHCFELFATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSIS 708
            .:..|||:.:..     |:|                .|.|.:|:.:|.|||.:..||:
Zfish   329 ERRFCFEVLSPS-----KSC----------------MMQADSEKLRQAWIKAVQSSIA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 26/187 (14%)
PH_GRP1-like 592..710 CDD:269954 30/118 (25%)
PH 596..708 CDD:278594 29/112 (26%)
acap2aXP_005163306.1 BAR_ACAP2 18..217 CDD:153322 36/230 (16%)
PH_ACAP 273..369 CDD:270070 30/123 (24%)
PH 273..365 CDD:278594 29/121 (24%)
ArfGap 402..520 CDD:279720
ANK repeat 657..686 CDD:293786
ANK 658..776 CDD:238125
Ank_2 660..754 CDD:289560
ANK repeat 690..721 CDD:293786
ANK repeat 723..754 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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