DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and iqsec2a

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_073766410.1 Gene:iqsec2a / 560461 ZFINID:ZDB-GENE-170302-3 Length:1639 Species:Danio rerio


Alignment Length:619 Identity:151/619 - (24%)
Similarity:244/619 - (39%) Gaps:180/619 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CSPGLGGSESVG---RKQPLQ-RSCL--DLSTTRVGCDG-CVSLEFFQSESPESRRSNSTFYV-- 82
            |..|.|.|:..|   |::.:. ..|:  :..|:|.|..| ...|.....:|..:..|:.|.|:  
Zfish   407 CQSGRGDSQDGGEGAREESVDFGECVWSNKPTSRRGVVGEQERLGVMHEDSTATSYSDVTLYMDD 471

  Fly    83 ----------------NTQ--NVSSAV--FKDNRQPLLERGSGSDSSPSSVCVRC---------- 117
                            :|:  .|||.|  .:|:|.  .|.|..::|..|:.|..|          
Zfish   472 GMPCSPLSIERVPSSTDTEYWGVSSGVGGREDSRD--TEGGGSTNSRRSTPCTECRDFRLRGSHL 534

  Fly   118 --------SCNSITKSGDRNETPTMA---------TPKSDIKIALKPPPKPRSPSMAPYTSVATY 165
                    |.:|:..| ||::..:::         |.....:..||..|.||.|:     ..|..
Zfish   535 PVLTIEPPSDSSVDMS-DRSDRGSLSRQLLYEQEPTAGGSPQGTLKHNPAPRMPN-----PCAAQ 593

  Fly   166 NITKLAPDSPPPASPTLSTQTVNCSDVTTKVTEVQRLPCDEPNTELISKRTEYKHTTITTTTRTL 230
            ..|:  |...|..||                     ||...|:..::... .:.|          
Zfish   594 GQTR--PTGRPIPSP---------------------LPTHLPHHAMMHHH-HHPH---------- 624

  Fly   231 IVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDD 295
             :..|:                   ..:.|..|....           .||.|.:...||     
Zfish   625 -LHHPL-------------------HHHPLPHMHHPY-----------PDPTSPSPTQPP----- 653

  Fly   296 MRFIDDSSNSQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRMLLDRNYINTEQSDNL 360
               :...|:|.|.....|.:.::      :.:|||...:..||...:|                 
Zfish   654 ---LTPLSSSSSAPLPASGMEQS------DGDNDSLNSTTNSNETINC----------------- 692

  Fly   361 VILRRPSKQIKDELCEVVSEMEALDVPEDCKHS------NKD----KQMSIGRKKFNMDPKKGIE 415
                ......:|.|.|.:..:.......:.:||      |.|    :...||...||..|:|||:
Zfish   693 ----SSGSSSRDSLREPLPPLGKQTYQRESRHSWDSPAFNNDVVQRRHYRIGLNLFNKKPEKGIQ 753

  Fly   416 YLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEK-NDFNEDVLKAFVALHDFTNLILVQALR 479
            ||:|...:...|..:|.|:.:.:||::..||::||.: ..||:|||...:...||:.:.|..|||
Zfish   754 YLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVLDEMDFSGMDLDDALR 818

  Fly   480 QFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDI---FTNTDTCYVLSFAIIMLNTSLHNPSVK-- 539
            :|....::.|||||::|::|.|:||||..||.:   |.|.||.::|:||||:|||.:::|:||  
Zfish   819 KFQAQIKVQGEAQKVERLVEAFSQRYCVCNPALVRQFQNPDTIFILAFAIILLNTDMYSPNVKAE 883

  Fly   540 DKPTVDQFISMNRGINNGGDLPRGLLESLYESIR 573
            .|..::.||...||::||.|:||.||..:|:.|:
Zfish   884 RKMKLEDFIKNLRGVDNGQDIPRDLLVGIYQRIQ 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 76/189 (40%)
PH_GRP1-like 592..710 CDD:269954
iqsec2aXP_073766410.1 None
Blue background indicates that the domain is not in the aligned region.

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