DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and pheta2

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001038864.1 Gene:pheta2 / 556313 ZFINID:ZDB-GENE-060825-273 Length:282 Species:Danio rerio


Alignment Length:109 Identity:36/109 - (33%)
Similarity:50/109 - (45%) Gaps:19/109 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 DKEGWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELF 659
            ||||:|:|:..|..::.||||:|..|.|:|.|...|:...|:|.||...|:.. :.....||.|.
Zfish    19 DKEGYLYKKRERNTTYLRRWFVLKGNLLFYQERPGDRNLLGVIVLEGCMVQAC-ETDGQFCFSLV 82

  Fly   660 ATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRL 703
            .||                 .|..| ||::|.....|:.||..|
Zfish    83 FTG-----------------PGLRT-YRLAADDHPSQESWIAAL 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680
PH_GRP1-like 592..710 CDD:269954 36/109 (33%)
PH 596..708 CDD:278594 35/108 (32%)
pheta2NP_001038864.1 PH_Ses 11..130 CDD:270105 36/109 (33%)
PH 18..108 CDD:278594 35/107 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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