DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and si:dkey-191m6.4

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_683216.5 Gene:si:dkey-191m6.4 / 555573 ZFINID:ZDB-GENE-121214-182 Length:696 Species:Danio rerio


Alignment Length:115 Identity:34/115 - (29%)
Similarity:58/115 - (50%) Gaps:15/115 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 KEGWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREI-HDRSKP--HCFE 657
            |.|||.||....|:|:.|||:|..:.|::::...:.:|:|.|.|:...|.|: .:..:|  |.||
Zfish    43 KAGWLKKQRSIMKNWQLRWFVLRADHLFFYKDEEETKPQGCISLKGSQVNELTANPEEPGRHLFE 107

  Fly   658 LFATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSI 707
            :...|..|  ||..:          |..:.:.|.|:.|..:|:|.:.:.|
Zfish   108 ILPAGEKD--KAAMS----------HESFLLMANTQSDMDDWVKAIRRVI 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680
PH_GRP1-like 592..710 CDD:269954 34/115 (30%)
PH 596..708 CDD:278594 34/115 (30%)
si:dkey-191m6.4XP_683216.5 PH-like 39..152 CDD:302622 34/115 (30%)
PH 41..145 CDD:278594 33/113 (29%)
RhoGAP_ARHGAP22_24_25 152..350 CDD:239855
GBP_C <601..680 CDD:303769
coiled coil 651..662 CDD:293879
coiled coil 670..680 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.