DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and pik3r3

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001017229.1 Gene:pik3r3 / 549983 XenbaseID:XB-GENE-6464721 Length:461 Species:Xenopus tropicalis


Alignment Length:587 Identity:100/587 - (17%)
Similarity:186/587 - (31%) Gaps:196/587 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 MAPYTSVATYNI---TKLAPDSPPPASPTLST-----QTVNCSDVTTKVTEVQRLPCDEPNTELI 212
            |.||::...:.|   ..:.|..||.:..:|||     .:|:..|......::.|   :|.|.:| 
 Frog    19 MMPYSTELIFYIEMDPPVLPPKPPKSMTSLSTDGSKENSVSLQDAEWYWGDISR---EEVNDKL- 79

  Fly   213 SKRTEYKHTTITTTTRTLIVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFM 277
               .:....|......:..|.....|.|.:.|.               .:::.:.::.|..|.  
 Frog    80 ---RDMPDGTFLVRDASTKVQGDYTLTLRKGGN---------------NKLIKIYHQDGKYGF-- 124

  Fly   278 EADPCSKNSLPP-------------PPYIDDMRFIDDSSNSQSESERNSNIHKTNKYTSKNNNND 329
             :||.:.||:..             .|.:|.......|...|.:..:..||....:...:.:...
 Frog   125 -SDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYPVSRYQQDQLVKEDNIDAVGRKLQEYHGQF 188

  Fly   330 SKRESQQSNLCESCRMLLDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHSN 394
            ..:..:...|.|        .|..|.|.   :.::|.:.:..:|..::..        |.| |: 
 Frog   189 QDKSKEYDKLYE--------EYTKTSQE---IQMKRTAIEAFNETIKIFE--------EQC-HT- 232

  Fly   395 KDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDV 459
            :::......::||   ::|.|..:|..::.::..             |:.:|:....|....:|:
 Frog   233 QERYSKEYMERFN---REGNEKEMERIIMNYEKL-------------KSRLGEIHDSKLRLEQDL 281

  Fly   460 LKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSF 524
            .|              |||           :.::||:.|.:......||..          :...
 Frog   282 KK--------------QAL-----------DNREIDKKMNSIKPDLIQLRK----------IRDQ 311

  Fly   525 AIIMLNTSLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMH 589
            .::.||    :..|:.|...|..     ||.|             |:|....|...:||  :|.|
 Frog   312 YLVWLN----HKGVRQKRINDWL-----GIKN-------------ENIDDTYFVSEEDD--NLPH 352

  Fly   590 TFFNPDKEGWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPH 654
                             |.  ::.||:.:.|.:...|..:.|.....:         |.:.||..
 Frog   353 -----------------YD--EKTWFVGDLNRIQAEELLSGKPDGAFL---------IRESSKKG 389

  Fly   655 CFELFATGGADIIKACKTDSEGKVVEGKH-TVYRMSA----ATEEDQQEWIKRL------TQSIS 708
            |:            ||...::|.|   || .:|..|.    |...:....:|.|      |..:.
 Frog   390 CY------------ACSVVADGDV---KHCVIYSTSRGYGFAEPYNLYSTLKELVLHYQHTSLVQ 439

  Fly   709 HN 710
            ||
 Frog   440 HN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 28/179 (16%)
PH_GRP1-like 592..710 CDD:269954 22/128 (17%)
PH 596..708 CDD:278594 22/122 (18%)
pik3r3NP_001017229.1 SH2_nSH2_p85_like 59..167 CDD:198195 20/132 (15%)
iSH2_PI3K_IA_R 172..332 CDD:355389 35/240 (15%)
SH2_cSH2_p85_like 351..454 CDD:198184 25/134 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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