DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and cyth2

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001005039.1 Gene:cyth2 / 448569 XenbaseID:XB-GENE-5834088 Length:397 Species:Xenopus tropicalis


Alignment Length:379 Identity:250/379 - (65%)
Similarity:309/379 - (81%) Gaps:8/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EQSDNLVILRRPS------KQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKG 413
            ||.:...|.||..      :::|:|:.||.:|:|.|...|:.|:..|.||:::||||||||||||
 Frog    15 EQQELKNIQRRKQELLADIQRLKEEIAEVTNEIENLGSTEERKNLQKSKQVAMGRKKFNMDPKKG 79

  Fly   414 IEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQAL 478
            |::|:||.||::..:::|.|||||||||||||||||||::|.|..||.|||.||:|.:|.|||||
 Frog    80 IQFLIENDLLKNTCENIAQFLYKGEGLNKTAIGDYLGERDDLNIRVLHAFVELHEFMDLNLVQAL 144

  Fly   479 RQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDKPT 543
            |||||||||||||||||||||.|||||||.||.:|.:|||||:|||||||||||||||:|||||:
 Frog   145 RQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFESTDTCYILSFAIIMLNTSLHNPNVKDKPS 209

  Fly   544 VDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLWK-QGGRY 607
            |::||:|||||||||||...||.:||:||:.||||||:||||||.|||||||:||||.| .|||.
 Frog   210 VERFIAMNRGINNGGDLSEDLLRNLYDSIKHEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRV 274

  Fly   608 KSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATGGAD-IIKACK 671
            |:||||||||.|||||||||||||||||||||||:|:||:.|..|.:||||:.....| :|||||
 Frog   275 KTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKMNCFELYIPDNKDQVIKACK 339

  Fly   672 TDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDILVQRKKKALS 725
            |:::|:||||.|||||:|||:.|::.||:|.:..:||.:|||::|..||||..|
 Frog   340 TEADGRVVEGNHTVYRISAASCEEKDEWMKCIRAAISRDPFYEMLAARKKKVSS 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 133/179 (74%)
PH_GRP1-like 592..710 CDD:269954 79/119 (66%)
PH 596..708 CDD:278594 73/113 (65%)
cyth2NP_001005039.1 DUF812 <10..>98 CDD:368550 35/82 (43%)
Sec7 61..243 CDD:366596 134/181 (74%)
PH_GRP1-like 258..378 CDD:269954 79/119 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 291 1.000 Domainoid score I1511
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31262
Inparanoid 1 1.050 534 1.000 Inparanoid score I1179
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000619
OrthoInspector 1 1.000 - - otm49115
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X419
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

Return to query results.
Submit another query.