DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and plek

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_957135.1 Gene:plek / 393814 ZFINID:ZDB-GENE-040426-1506 Length:352 Species:Danio rerio


Alignment Length:136 Identity:35/136 - (25%)
Similarity:61/136 - (44%) Gaps:33/136 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 KEGWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFA 660
            :||:|.|:|....|||..|.:|.|:.:.:|:..||:..:|:|||:                    
Zfish     7 REGYLVKKGTVLNSWKAVWVVLKDDAIEFFKKKTDRNAKGMIPLK-------------------- 51

  Fly   661 TGGADIIKACKTDSEG----KVVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDILVQRKK 721
              ||.:...|:..|:.    ||...|:..:...|...|:::.|:|.:.::|:       .:|..|
Zfish    52 --GATLTSPCQDFSKRALVFKVSTAKNQDHYFQATHLEEREHWVKDIRRAIT-------CLQGGK 107

  Fly   722 KALSKS 727
            |...||
Zfish   108 KFARKS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680
PH_GRP1-like 592..710 CDD:269954 30/117 (26%)
PH 596..708 CDD:278594 29/115 (25%)
plekNP_957135.1 PH1_Pleckstrin_2 3..110 CDD:270113 33/131 (25%)
PH 5..100 CDD:278594 29/114 (25%)
DEP_PLEK1 125..223 CDD:239892
PH2_Pleckstrin_2 239..348 CDD:270114
PH 245..349 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.