DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and cyth1a

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_017208742.1 Gene:cyth1a / 321938 ZFINID:ZDB-GENE-030131-657 Length:419 Species:Danio rerio


Alignment Length:382 Identity:256/382 - (67%)
Similarity:313/382 - (81%) Gaps:9/382 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 INTEQSDNLVILRRPSKQ-------IKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMD 409
            :..|:...|..:||..::       :|||:.||.||:|.|...|:.|:..::||:::||||||||
Zfish    35 LTPEEQKELENIRRRKQELLDDIQRLKDEIAEVTSEIENLGSTEERKNMQRNKQVAMGRKKFNMD 99

  Fly   410 PKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLIL 474
            |||||::|:||.||::..:|:|.|||||||||||||||||||::|||..||.|||.||:||:|.|
Zfish   100 PKKGIQFLIENDLLKNTSEDIARFLYKGEGLNKTAIGDYLGERDDFNIQVLHAFVELHEFTDLNL 164

  Fly   475 VQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVK 539
            |||||||||||||||||||||||||.|||||||.||.:|.:|||||:|||||||||||||||:||
Zfish   165 VQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFQSTDTCYILSFAIIMLNTSLHNPNVK 229

  Fly   540 DKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLWKQG 604
            |||||::|||||||||:|||||..||.:|||||:.||||||:||||||.|||||||:||||.|.|
Zfish   230 DKPTVERFISMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLG 294

  Fly   605 GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATGGAD-IIK 668
            ||.|:||||||||.|||||||||||||||||||||||:|:||:.|: ||:|||||.....| :||
Zfish   295 GRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDK-KPNCFELFIPDNKDQVIK 358

  Fly   669 ACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDILVQRKKKALS 725
            ||||:::|:||||.||.||:||.|.|::.||:..:..:||.:|||::|..||||..|
Zfish   359 ACKTEADGRVVEGNHTFYRISAPTTEEKDEWMNSIKAAISRDPFYEMLAARKKKVSS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 139/179 (78%)
PH_GRP1-like 592..710 CDD:269954 79/118 (67%)
PH 596..708 CDD:278594 73/112 (65%)
cyth1aXP_017208742.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592608
Domainoid 1 1.000 298 1.000 Domainoid score I1419
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31262
Inparanoid 1 1.050 534 1.000 Inparanoid score I1168
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000619
OrthoInspector 1 1.000 - - otm25514
orthoMCL 1 0.900 - - OOG6_103039
Panther 1 1.100 - - O PTHR10663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5313
SonicParanoid 1 1.000 - - X419
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.920

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