DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and CG5937

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_572289.2 Gene:CG5937 / 31537 FlyBaseID:FBgn0029834 Length:2051 Species:Drosophila melanogaster


Alignment Length:787 Identity:135/787 - (17%)
Similarity:239/787 - (30%) Gaps:304/787 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HQKRPSISNWFSSLRRQPKNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVGCDGCVSLEFFQSE 69
            |...|.|.:|...:.:          .|.|..:..|.  .:.|..::|..|       :||.:..
  Fly  1404 HLLVPMIQDWLRYINK----------TGSSWQLVEKN--FKHCCCMTTDLV-------VEFIEKS 1449

  Fly    70 SPESRR---------------SNSTFYVNTQNVSSAVFKDNRQ----PLLERGSG----SDSSPS 111
            .||.||               :::..|...:.|:..:.::.:|    .:.:.|.|    .|||.|
  Fly  1450 VPEQRRLGAGTKTRLAQIVHPADNLLYSKLKFVTERIEREQQQQQSPSVQDHGCGYTQQYDSSSS 1514

  Fly   112 SVCVRCSCNSITKSGDRN---ETPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNITKLAPD 173
            |.......|.....|..:   |:||..:  ....:|||                   .:..:..:
  Fly  1515 SASEEQQKNGGGVGGGGSNLIESPTKIS--GSATLALK-------------------QLLLVLIE 1558

  Fly   174 SPPPASPTLSTQTVNCSDVTTKVTEVQRLPCDEPNTELISKRTEYKHTTITTTTRTLIVSRPVEL 238
            ....:...::..:|:|                            .||..::|           .:
  Fly  1559 CAAQSQEAIARISVSC----------------------------LKHVILST-----------GM 1584

  Fly   239 LLNENGEIIARRSPRKSRSNSLG--RMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDDMRFIDD 301
            |.||:..:||..:..::.:.::.  |.|..        .|.|    ..||           |..|
  Fly  1585 LFNESQWMIACSAIHRACTVTIAPLRQLSF--------AFHE----KSNS-----------FYGD 1626

  Fly   302 SSNSQSESERNSNIHKTNKYTSKNNN---NDSKRESQQSNL----CESCRMLLDRNY------IN 353
            .:|.:..:.|:|::.:..:..:....   :|::||..|:..    ...|::..||:|      :|
  Fly  1627 CANVKVAARRDSSLEELARIYALAQQVFLSDNQREPGQNQAPTPSASQCKLSDDRSYSFLLYPLN 1691

  Fly   354 TEQSDNL--VILRRPSKQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEY 416
            ...:.||  .::|.|.|.:      ||.                                     
  Fly  1692 NGFNSNLDNFVIRIPFKNL------VVG------------------------------------- 1713

  Fly   417 LVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDF-----TNLILVQ 476
            |:.|::|.   |.||..|.........|:...:     |:.....|....||:     :..||::
  Fly  1714 LLANQMLL---QLVAKLLLSRLKCVPQAVSTCI-----FDNYAASAASPSHDYDLDFRSKEILLR 1770

  Fly   477 ALRQFLWSF----RLPG---EAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLH 534
            .::|:|.|.    ..||   ..||:.. :|..|..|.|:         |...:.:.|.::::.|:
  Fly  1771 CVKQYLMSALEFDSRPGLKFLMQKVSN-IEYAANLYKQM---------TSSWMIYYIALVDSHLN 1825

  Fly   535 NPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGW 599
            :..|               .|.|.:....:|||. ..:.|...|                .||.:
  Fly  1826 DIVV---------------YNLGPEDLNFILESC-SRLNTTTVK----------------KKENF 1858

  Fly   600 LWKQGGRYKSWKRRWFILNDN----CLYYFEYTTDKEPRGIIPLENISVREI------------- 647
            :           |..|.|.|.    |..|              |.|.::.||             
  Fly  1859 V-----------RYLFCLQDAWNLVCELY--------------LSNSALHEIESGSGKLRQKPPQ 1898

  Fly   648 ---HDRSKPHCFELFATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSIS- 708
               |.::||.|..|...|.|::     ||:......|..|........:|::...:..|..... 
  Fly  1899 LLHHPQTKPMCISLNGNGDAEM-----TDTGSGSGSGSSTSPSKCVQLQEEENVTMTTLISEFQP 1958

  Fly   709 ---HNPF 712
               .|||
  Fly  1959 KCRSNPF 1965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 35/193 (18%)
PH_GRP1-like 592..710 CDD:269954 25/141 (18%)
CG5937NP_572289.2 Sec7 451..692 CDD:469626
DUF1981 1115..>1177 CDD:462756
Blue background indicates that the domain is not in the aligned region.

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