DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and SPBC211.03c

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_596613.1 Gene:SPBC211.03c / 2540746 PomBaseID:SPBC211.03c Length:1462 Species:Schizosaccharomyces pombe


Alignment Length:538 Identity:137/538 - (25%)
Similarity:229/538 - (42%) Gaps:100/538 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 HTTITTTT----RTLIVSRPVELLLNENGEI--------IARRSPR-KSRSNSLGRM---LDVQN 268
            ||.:.|.:    .||:.:.|..|.|.:...|        |...:|| ::...||.::   ||:..
pombe   353 HTALLTNSLLVMTTLLQAMPGSLKLQQELFISYLISCLHIPSTTPRERNVETSLHKVVSSLDLSE 417

  Fly   269 EI----GTGGLFMEADPCSKNSLPPPPYIDDM-------------RFIDDSSNSQSESERNSNIH 316
            ||    .|...|.|....:.::...||.:.::             ..||...|...:.:.:....
pombe   418 EISPDRATPTSFTERKRFAFDTRNRPPEVRELIVECLGSLSRIPYFLIDLYVNYDCDPQMSDLAI 482

  Fly   317 KTNKYTSKNNNNDSKRESQQSNLCESCRMLLDR--NYINTEQSDNLVILRRPSKQIKDELCEVVS 379
            ...|..::|...||.|.| .:|:...|   ||.  |:|.............|:...||::.:.:.
pombe   483 DLLKVLTRNCLVDSARYS-TANVPPLC---LDALLNFIYYFHEHLQPCYNDPNNTFKDDVAKTLI 543

  Fly   380 EMEALDVPEDCKHSNKDKQMSI-GRKKFNMDPKKGIEYLVENRLLRH--DPQDVAHFLYKGEGLN 441
            |            |.|.|.:.| |.:.||..|..||.:|.::.:::.  :|..:..|.:....|:
pombe   544 E------------SKKRKAIIIEGAELFNESPSDGIAFLTQHSIIKQSDNPTCIVEFFHSTNRLS 596

  Fly   442 KTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYC 506
            |..:|::|.:.:  |..:|.||::..||....:.:|||..|.|||||||:|.|:|::|||:..|.
pombe   597 KRVLGEFLTKGS--NSHILNAFISAFDFKGKRIDEALRLLLQSFRLPGESQLIERVLETFSHYYM 659

  Fly   507 QLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKD--KPTVDQFISMNRGINNGGDLPRGLLESLY 569
            ..|||..::.|..:|||::||||||..|||::|.  :.|:|.|....||:|:|.|..|..|..:|
pombe   660 SANPDSMSSKDAAFVLSYSIIMLNTDQHNPNIKSQRRMTLDDFCRNVRGVNDGQDFDRNFLSEIY 724

  Fly   570 ESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDKEPR 634
            ::|:.....:.::...:|...:        :|.:                  |......|:...|
pombe   725 KAIKENEIIVAEEHDTELSFLY--------IWSK------------------LQQSVKITEPFKR 763

  Fly   635 GIIPLENISVREIHDRSKPHCFELFATGGADIIKACKTDSEG----KVVEGKHTVYRMSAATE-- 693
                    |...:||  |....|::.:..|.:|....|.:|.    :||.|......::||.|  
pombe   764 --------SSSNVHD--KIVFLEVWKSIMAALIYVFSTATEDTVFYRVVNGIQQATEVAAAYELN 818

  Fly   694 EDQQEWIKRLTQSISHNP 711
            |.....|:|..|..:.:|
pombe   819 EPVDYAIERFCQFTALDP 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 68/184 (37%)
PH_GRP1-like 592..710 CDD:269954 23/123 (19%)
PH 596..708 CDD:278594 23/117 (20%)
SPBC211.03cNP_596613.1 Sec7_N 287..475 CDD:289549 26/121 (21%)
COG5307 289..1303 CDD:227623 137/538 (25%)
Sec7 548..732 CDD:279680 68/185 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10663
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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