DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and PSD3

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_016868747.1 Gene:PSD3 / 23362 HGNCID:19093 Length:1067 Species:Homo sapiens


Alignment Length:809 Identity:162/809 - (20%)
Similarity:278/809 - (34%) Gaps:256/809 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GRKQPL---QRSC--LDLSTTRVGCDGCVSLEFFQSE--------------SPESRRSNSTFYVN 83
            |||..:   :.||  ..|.::.|.|....|:.|.:.:              |....|.....:|.
Human   256 GRKGAVCVQEPSCPLASLGSSAVTCHSAGSVGFLKEQRSALGREHPGGCDRSSSMGRPGRVKHVE 320

  Fly    84 TQNV----SSAVFKDNRQPL-----LERGSGSDSSPSSVCVR--------CSCNSITKS-GDRNE 130
            .|.|    :....::.:.|:     |:|.:..||..||...|        |:.:|:|:: .|.:.
Human   321 FQGVEILWTGGDKRETQHPIDFETSLQRTASPDSKESSKVPRHLISSAGLCNSSSLTENVWDESW 385

  Fly   131 TPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNITKLAPDSPPPASPTLSTQTVNCSDVTTK 195
                                 ::||..|.||..|::..:|............:.|          
Human   386 ---------------------KAPSERPGTSSGTFSPVRLDESGEDEVFLQENKQ---------- 419

  Fly   196 VTEVQRLPCDEPNTELISKRTEY-----------------------KHTTITTTTRTLIVSRPVE 237
              .:::.|..|.:.|.||::.|:                       :..||...|.....:..:|
Human   420 --HLEKTPKPERDRERISEQEEHVKGEDEDILGPGYTEDSTDVYSSQFETILDNTSLYYSAESLE 482

  Fly   238 LLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDDMRFIDDS 302
            .|.:|.....:...|       |..|  :|..|..||.|:|.                       
Human   483 TLYSEPDSYFSFEMP-------LTPM--IQQRIKEGGQFLER----------------------- 515

  Fly   303 SNSQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRMLLDRNYIN--TEQSDNLVILRR 365
                               ||...:.|....|....:.    |.......|  .:.||::.....
Human   516 -------------------TSGGGHQDILSVSADGGIV----MGYSSGVTNGLNDASDSIYTKGT 557

  Fly   366 P-------SKQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLL 423
            |       :..:|....|..|||.:.::.|    ....:.:|.|... |::..|        ||.
Human   558 PEIAFWGSNAGVKTTRLEAHSEMGSTEILE----KETPENLSNGTSS-NVEAAK--------RLA 609

  Fly   424 RHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLP 488
            :.        ||:.:...::.:..:||:.|:|::.|.:.::...|||.:.|.|:||.|..:|.|.
Human   610 KR--------LYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLV 666

  Fly   489 GEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDKPTVDQFISMNRG 553
            ||.|:.:|::..|:.||...|||...:.|..:.|:.||::|||.||..::..|.|..:||:..:|
Human   667 GETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAIMLLNTDLHGHNIGKKMTCQEFIANLQG 731

  Fly   554 INNGGDLPRGLLESLYESIR---------------------------------------TEPF-K 578
            :|.|.|..:.||::||.||:                                       |.|| .
Human   732 VNEGVDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSESTEEKANGTHPKTISRIGSTTNPFLD 796

  Fly   579 IPQDDGNDLMHTFF-----NPDKEGWLWKQGGRYKSWKRRWFILNDNCLYY--FEYTTDK----- 631
            ||.|....:..:.|     :.|.:|....:|.|  .||..:.:|....||.  .||..:|     
Human   797 IPHDPNAAVYKSGFLARKIHADMDGKKTPRGKR--GWKTFYAVLKGTVLYLQKDEYKPEKALSEE 859

  Fly   632 EPRGIIPLENISVREIHD-RSKPHCFELFATGGADIIKACKTDSEGKVVEGKHTVYRMSAATEED 695
            :.:..:.:.:....:..| ..||:.|:|                  |..:.:  |......:.|:
Human   860 DLKNAVSVHHALASKATDYEKKPNVFKL------------------KTADWR--VLLFQTQSPEE 904

  Fly   696 QQEWIKRL---TQSISHNPFYDILVQRKK 721
            .|.||.::   ....|..||...:..:||
Human   905 MQGWINKINCVAAVFSAPPFPAAIGSQKK 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 57/218 (26%)
PH_GRP1-like 592..710 CDD:269954 25/133 (19%)
PH 596..708 CDD:278594 22/122 (18%)
PSD3XP_016868747.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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