DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and Plcg1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_067255.2 Gene:Plcg1 / 18803 MGIID:97615 Length:1302 Species:Mus musculus


Alignment Length:758 Identity:142/758 - (18%)
Similarity:249/758 - (32%) Gaps:286/758 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SSPSSV-----CVRCSCNSIT----KSGD------RNETPTMATPKSDIKIALK-----PPPKPR 152
            ||.||:     |:|..|..|.    ...|      ...|.|.....||:...:|     ....|.
Mouse   345 SSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPV 409

  Fly   153 SPSMAPYTSVA-----TYNITKLAPDSPPPASPTLSTQTVNCSDVTTKVTEVQRLPCDEPNTELI 212
            ..|:..:.|:|     ..:..|:..|       ||.|:.|:.:        ...||  .||.  :
Mouse   410 ILSIEDHCSIAQQRNMAQHFRKVLGD-------TLLTKPVDIA--------ADGLP--SPNQ--L 455

  Fly   213 SKRTEYKHTTITTTTRTLIVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFM 277
            .::...||..:...:....|  |..::.:||                     |:.|.|..|.|::
Mouse   456 RRKILIKHKKLAEGSAYEEV--PTSVMYSEN---------------------DISNSIKNGILYL 497

  Fly   278 EADPCSKNSLPPPPYIDDMR--FIDDSSNSQ--------SESERNSNIHKTNKY----------- 321
            | ||.:....|....:...:  :.:::|:.|        .|:..::.:|.:.|:           
Mouse   498 E-DPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASSSTELHSSEKWFHGKLGAGRDG 561

  Fly   322 --------------TSKNNNNDSKRESQ-----------QSNLCESCRMLLDRNYINTEQ---SD 358
                          |...:.:...|||:           ::...:.|| :..|....|.:   :|
Mouse   562 RHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCR-IHSRQDAGTPKFFLTD 625

  Fly   359 NLVILRRPSKQIKDELCEVVSEMEAL-------------DVPEDCKHSNKD-KQMSIGRKK---- 405
            |||.         |.|.::::..:.:             .||:...|.:|: ...|:.|.:    
Mouse   626 NLVF---------DSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHM 681

  Fly   406 FNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGE-----KNDFNEDVLKAFVA 465
            ....|:.| .:||..   |::|...| ..::.||..|.......|:     .::|  |.|...::
Mouse   682 LMRVPRDG-AFLVRK---RNEPNSYA-ISFRAEGKIKHCRVQQEGQTVMLGNSEF--DSLVDLIS 739

  Fly   466 LHDFTNLILVQALRQFLWSFRLPGEA-QKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIML 529
            .::...|.....||     :.:..|| :||......:...|...||..:...             
Mouse   740 YYEKHPLYRKMKLR-----YPINEEALEKIGTAEPDYGALYEGRNPGFYVEA------------- 786

  Fly   530 NTSLHNPSVKDKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHT---- 590
                 ||    .||.                 :..:::|::      :|..::|  :|..|    
Mouse   787 -----NP----MPTF-----------------KCAVKALFD------YKAQRED--ELTFTKSAI 817

  Fly   591 FFNPDKE--GWLWKQGGRYKSWKRRWFILNDNCLYYFEYTTDK---EPRGIIPLENISVREIHDR 650
            ..|.:|:  || |:  |.|...|:.||..|     |.|...:.   ||.          ||..|.
Mouse   818 IQNVEKQDGGW-WR--GDYGGKKQLWFPSN-----YVEEMINPAVLEPE----------REHLDE 864

  Fly   651 SKPHCFELFATGGADIIK------ACK--TDSEGKVVEGKHTVYRMS------------AATEED 695
            :.|.         .|:::      ||:  ...|||  ..:..|:.:|            |.::|:
Mouse   865 NSPL---------GDLLRGVLDVPACQIAIRPEGK--NNRLFVFSISMPSVAQWSLDVAADSQEE 918

  Fly   696 QQEWIK-----------RLTQSISHNPFYDILVQRKKKALSKS 727
            .|:|:|           |||:.       .::.:|||.||..|
Mouse   919 LQDWVKKIREVAQTADARLTEG-------KMMERRKKIALELS 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 31/189 (16%)
PH_GRP1-like 592..710 CDD:269954 35/153 (23%)
PH 596..708 CDD:278594 34/147 (23%)
Plcg1NP_067255.2 PH_PLC_gamma 29..151 CDD:270168
PH <71..142 CDD:278594
PI-PLCc_gamma 319..>466 CDD:176534 30/139 (22%)
PH-like 489..>523 CDD:302622 7/34 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 522..545 3/22 (14%)
SH2_N-SH2_PLC_gamma_like 545..649 CDD:199829 16/113 (14%)
SH2_C-SH2_PLC_gamma_like 663..765 CDD:198186 24/113 (21%)
SH3_PLCgamma1 791..850 CDD:212903 19/91 (21%)
PHsplit_PLC_gamma <864..933 CDD:270054 14/79 (18%)
PH <872..929 CDD:278594 12/58 (21%)
PLCYc 954..1069 CDD:128454 1/1 (100%)
C2_PLC_like 1087..1211 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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