DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and bris-1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_500420.3 Gene:bris-1 / 177142 WormBaseID:WBGene00019726 Length:640 Species:Caenorhabditis elegans


Alignment Length:491 Identity:118/491 - (24%)
Similarity:182/491 - (37%) Gaps:157/491 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DSSPSSVCVRCSCNSITKSGDRNETPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNITKLA 171
            |:.|..:..||.    ..:..|||....:...:.:...|:.....||              |.|.
 Worm    74 DTIPDHLDARCG----VSNSQRNELSLTSRYATSLSAQLRIDRAARS--------------TTLD 120

  Fly   172 PDSPPPASPTL-STQTVNCSDVTTKVTEVQRLPCDEPNTELISKRTEYKHTTITTTTRTLIVSRP 235
            ...|.||.|.| :.|..|..|                  .|:|.|                    
 Worm   121 RSPPSPAPPVLVNLQNSNMID------------------SLMSPR-------------------- 147

  Fly   236 VELLLNEN-GEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDDMRFI 299
               |.|.. |...:|.:|..:...|....|...:       .:..:|...|||   |.:|..|..
 Worm   148 ---LGNRRFGAAASRCAPAAAELTSTEVWLPRPS-------LVNHNPAHSNSL---PRLDKHRVH 199

  Fly   300 D--DSSNSQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRMLLDRNYINTEQSDNLVI 362
            :  :|||.:.:||                                                    
 Worm   200 ERSESSNGRKKSE---------------------------------------------------- 212

  Fly   363 LRRPSKQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDP 427
             .:|.:|:.|:                    .:.:|..|....||..|::|::.|.....:::.|
 Worm   213 -VKPPRQMTDQ--------------------ERKRQYRIALNFFNKKPERGVQLLTAWGFVKNSP 256

  Fly   428 QDVAHFLYKGEGLNKTAIGDYLGE-KNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEA 491
            ..:|..|:...||:|:.||:|:|. .:.::..|||.|.||.|...|.:..|||:.:..|.||.||
 Worm   257 DSLASLLFGRRGLSKSMIGEYIGTLHSPYHSLVLKYFTALIDIRGLEVDVALRKAMQFFILPKEA 321

  Fly   492 QKIDRMMETFAQRYCQLNPDIFTN----TDTCYVLSFAIIMLNTSLHNPSVKDKPTVDQFISMNR 552
            :||||:::.||..|.:.||...::    .||.::||||||||||.||:|:||.:.|...|:...|
 Worm   322 EKIDRIIQAFALHYSKSNPKRTSHYRGGWDTIHLLSFAIIMLNTDLHSPNVKQRMTQADFVKNLR 386

  Fly   553 GIN------NGGDLPRGLLESLYESIRTEPFKIPQD 582
            |.:      ||.|:.|..||.:|:.|:.:..|...|
 Worm   387 GQDKISGEKNGEDIDRKTLEGIYDRIKKDELKAGDD 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 71/190 (37%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
bris-1NP_500420.3 Sec7 224..417 CDD:366596 71/192 (37%)
PH_IQSEC 445..573 CDD:270128
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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