DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and Cyth1

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_063124376.1 Gene:Cyth1 / 116691 RGDID:620397 Length:400 Species:Rattus norvegicus


Alignment Length:382 Identity:252/382 - (65%)
Similarity:315/382 - (82%) Gaps:8/382 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 INTEQSDNLVILRRPSKQ-------IKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMD 409
            :..|:...|..:||..::       :|:|:.||.:|:|:|...|:.|:..::||:::||||||||
  Rat    15 LTAEERQELENIRRRKQELLADIQRLKEEIAEVANEIESLGSTEERKNMQRNKQVAMGRKKFNMD 79

  Fly   410 PKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLIL 474
            |||||::|:||.||::..:|:|.|||||||||||||||||||:::|:..||.|||.||:||:|.|
  Rat    80 PKKGIQFLIENGLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFSIQVLHAFVELHEFTDLNL 144

  Fly   475 VQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVK 539
            |||||||||||||||||||||||||.|||||||.|..:|.:|||||||||||||||||||||:||
  Rat   145 VQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNTGVFQSTDTCYVLSFAIIMLNTSLHNPNVK 209

  Fly   540 DKPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLWKQG 604
            |||||::||:||||||:|||||..||.:|||||:.||||||:||||||.|||||||:||||.|.|
  Rat   210 DKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLG 274

  Fly   605 GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENISVREIHDRSKPHCFELFATGGAD-IIK 668
            ||.|:||||||||.|||||||||||||||||||||||:|:||:.|..||:||||:.....| :||
  Rat   275 GRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIK 339

  Fly   669 ACKTDSEGKVVEGKHTVYRMSAATEEDQQEWIKRLTQSISHNPFYDILVQRKKKALS 725
            ||||:::|:||||.|||||:||.|.|::::|||.:..:||.:|||::|..||||..|
  Rat   340 ACKTEADGRVVEGNHTVYRISAPTPEEKEDWIKCIKAAISRDPFYEMLAARKKKVSS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 136/181 (75%)
PH_GRP1-like 592..710 CDD:269954 80/118 (68%)
Cyth1XP_063124376.1 None

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