DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and Gbf1

DIOPT Version :10

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_006526643.1 Gene:Gbf1 / 107338 MGIID:1861607 Length:1862 Species:Mus musculus


Alignment Length:361 Identity:94/361 - (26%)
Similarity:177/361 - (49%) Gaps:62/361 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 SKNSLPPPPY--------IDDMRFIDDSSNSQSESERNSNIHKTNK-------YTSKNNNNDSKR 332
            |||:.|....        :|.:..:.||:.|..:::..:.:::..|       :.:.:.|.::.:
Mouse   561 SKNAFPVSGQLYTTHLLSLDALLTVIDSTESHCQAKVLNTLNQQEKKETARPGFEAVDGNPETNK 625

  Fly   333 ESQQSNLCESCRMLLDR--------NYINTEQSD--------------NLVILRRPSKQIKDELC 375
            ..:.::..:|..:.||.        .:::||...              :....|:|.:    ..|
Mouse   626 SERATSDGKSTGVALDARGLHFPSGGWLSTEHGKPGCRDLEEAGDSGADKKFTRKPPR----FSC 686

  Fly   376 EVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLR--HDPQDVAHFLYKGE 438
            .:....|.:::      .||.|.:..|.::||..|||||::|.|..||.  .|..:||.:|.:..
Mouse   687 LLPDPRELIEI------KNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNTEVAQWLRENP 745

  Fly   439 GLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQ 503
            .|:|..||:::.::.  |.|:|::||:...|..|.|.:|||.:|.:|||||||..|.|::|.|.:
Mouse   746 RLDKKMIGEFVSDRK--NMDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIHRLLEVFTE 808

  Fly   504 RYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDK---PTVDQFISMNRGINNGGDLPRGLL 565
            .:...|...|.|:|.|:.|::|:|||||..||.:|:.:   .|:::|....:|:|.|.|..:.:|
Mouse   809 HWRSCNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNAPMTLEEFRKNLKGVNGGKDFEQDIL 873

  Fly   566 ESLYESIRTEPFKIPQDDGNDLMHTFFNPDKEGWLW 601
            |.:|.:|:.|...:|::....:        :|.::|
Mouse   874 EDMYHAIKNEEIVMPEEQTGLV--------RENYVW 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 395..577 CDD:460178 71/186 (38%)
PH_GRP1-like 592..710 CDD:269954 2/10 (20%)
Gbf1XP_006526643.1 PLN03076 <430..>1179 CDD:215560 94/361 (26%)
Sec7 700..885 CDD:460178 71/186 (38%)
PHA03247 <1730..1860 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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