DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and iqsec1a

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001373523.1 Gene:iqsec1a / 100334106 ZFINID:ZDB-GENE-120813-2 Length:1000 Species:Danio rerio


Alignment Length:662 Identity:165/662 - (24%)
Similarity:265/662 - (40%) Gaps:143/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPSISNWFSSLRRQPKNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVGCDGCV---------- 61
            :||.:.:..|.||:|.:.:........|||......||...:::...:.|.....          
Zfish   176 QRPKLQHSQSILRKQAEEEAIKRSRSLSESYELSTDLQDKKVEMLERKYGGRFITRHAARTIQTA 240

  Fly    62 --------SLEFFQSESPESRRSNSTFYVN---------TQNVSSAVFKDNRQPLLERGSGSDSS 109
                    :.|..:|...|:|.|......|         .:.|.|:.|:..:..|:|..|     
Zfish   241 FRHYQMNKNFERLRSSMSENRMSRRILLSNMRMQFSFEAPEKVHSSFFEGRQMSLMEESS----- 300

  Fly   110 PSSVCVRCSCNSITKSGDR----NETPTMATPKSDIKIALKPPPKPRSPSMAPYTSVATYNITKL 170
                    ...::.:.|::    .|.|......:|....|:.....:..|:|.....| .|...|
Zfish   301 --------HIGAMVQPGEKVPVILEAPETQNDLTDTITELEDTFSKQVKSLAESIDDA-LNCRSL 356

  Fly   171 APDSPPPASPTLSTQTVN--------------CSDVTTKVTEVQRLPCDEP-------NTELISK 214
            ..:...|.......|...              | |||..:.|.:..|..:|       :|:.:|.
Zfish   357 HKEEIQPEQTVCELQQKRELPQPDEHHRLDEIC-DVTLFIDEEELSPLVQPSSAESDQHTQSVSA 420

  Fly   215 RTEY--KHTTITTTTRT----------LIVSRPVELLLNENGEIIARRSPRKSRSNSLGRMLDVQ 267
            ..||  ....:.|:.|:          |.|..|| |.:....:..|..|.|..:.     ::..|
Zfish   421 SQEYWSMDANMDTSARSTPSLDYQSPKLCVDLPV-LTIEPPSDSSADASDRSEQG-----LVQTQ 479

  Fly   268 NEIGTGGLFMEADPCSKNSLP-----------PPPYIDDMRFIDDSSNSQSESERNSNIHKTNKY 321
            |..........|:|  |:.||           |..:...:..:..:.:.||:||.:.:....:..
Zfish   480 NVPKQTTAAPRANP--KHGLPARVPSLSGEEEPLRHRQVVSHLATNGSRQSKSESDFSDGDNDSI 542

  Fly   322 TSKNNNND---SKRESQQSNLCESCRMLLDRNYINTEQSDNLVILRRPSKQI--KDELCEVVSEM 381
            .|.:|:.|   |:..|.|.||                           |||.  ||       ..
Zfish   543 NSNSNSIDTINSESSSSQQNL---------------------------SKQTYHKD-------TR 573

  Fly   382 EALDVPEDCKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIG 446
            .:.|.|.......:.:|..||...||..|:|||:||.|...:...|..|||||.:.:||::..||
Zfish   574 NSWDSPASSSDIMRKRQYRIGLNLFNKKPEKGIQYLTERGFIPDTPVGVAHFLLQRKGLSRQMIG 638

  Fly   447 DYLGEK-NDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNP 510
            ::||.: ..||.|||...|...||:.:.|.:|||:|....|:.|||||::|::|.|:||||..|.
Zfish   639 EFLGNRQKQFNRDVLDCVVDELDFSGMELDEALRKFQAQIRVQGEAQKVERLIEAFSQRYCICNH 703

  Fly   511 DI---FTNTDTCYVLSFAIIMLNTSLHNPSVK--DKPTVDQFISMNRGINNGGDLPRGLLESLYE 570
            |:   |.|.||.::|:||||:|||.:::|:||  .|..::.|:...||:::|.|:||.:|..:||
Zfish   704 DVVRQFRNPDTIFILAFAIILLNTDMYSPNVKIERKMKLEDFVKNLRGVDDGEDIPREMLVGIYE 768

  Fly   571 SIRTEPFKIPQD 582
            .|:.:..|..:|
Zfish   769 RIQKKELKTNED 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 79/185 (43%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
iqsec1aNP_001373523.1 Sec7 587..775 CDD:396096 79/187 (42%)
IQ_SEC7_PH 807..942 CDD:406773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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