DRSC/TRiP Functional Genomics Resources

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Protein Alignment step and iqsec1b

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:XP_005169390.2 Gene:iqsec1b / 100148736 ZFINID:ZDB-GENE-120813-1 Length:1252 Species:Danio rerio


Alignment Length:697 Identity:178/697 - (25%)
Similarity:281/697 - (40%) Gaps:176/697 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPSISNWFSSLRRQPKNKKCSPGLGGSESVGRKQPLQRSCLDLSTTRVG-------CDGCVSLE 64
            :||.:.:..|.||:|.:.:........|||......||...:::...:.|       ....:...
Zfish   195 RRPKLQHSQSILRKQAEEEAIKRSRSLSESYELSTDLQDKQVEMLERKYGGRFITRHAARTIQTA 259

  Fly    65 FFQ--------------SESPESRR---SNSTF---YVNTQNVSSAVFKDNRQPLLERGS----- 104
            |.|              ||:..|||   ||...   :...:.|.|:.|:..:..|.:.||     
Zfish   260 FRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSLTDDGSKLGAL 324

  Fly   105 ----------GSDSSPS-------------------------SVCVRCSCNSITKSGDRNET-PT 133
                      .:..||:                         |:....:|.|:  .||..:: .|
Zfish   325 VQSERGEMVPANMKSPAVQSDFTDAITELEDVFSRQVKSLAESIDDALNCRSL--HGDEGQSEAT 387

  Fly   134 MATPKSDIKIALKPPP------KPRSPSMAPYTSVATY-NITKLAP--------DSPPPASPTLS 183
            ...|..:.::..:..|      :.|....|.|:.|..| :..:|:|        |.|......|.
Zfish   388 RGHPDLEQEVTYQVKPSHGSEHRKRDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLR 452

  Fly   184 TQTVNCS-------------DVTTKVTEVQRLPCDEPNTELISKRTEYKHTTITTTTRTLIVSRP 235
            .:::|.|             |..|.......|.|.|       :|....|..:.|      :..|
Zfish   453 LRSLNSSQDYWSLAHKDEKADTDTSCRSTPSLECQE-------QRLRIDHLPLLT------IEPP 504

  Fly   236 ----VELLLNENGEIIARRSPRKSRSNSLGRMLDVQNEIGTGGLFMEADP--CSKNSLPP----- 289
                |||            |.|..|| ||.|    ||....|....:..|  ...::|||     
Zfish   505 SDSSVEL------------SDRSDRS-SLKR----QNAYDRGIASQQGSPKHIPSHALPPRGPAR 552

  Fly   290 --------PPYIDDMRFIDDSSNSQSESERNSNIHKTNKYTSKNNNNDSKRESQQSNLCESCRML 346
                    |..::....|:.::|.||:||.:.:....:...|.:|:||:...|.:|:..:|.|  
Zfish   553 EDEAPRHRPRQLESHLAINGTANRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSSRDSLR-- 615

  Fly   347 LDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPEDCKHSNKDKQMSIGRKKFNMDPK 411
                    ||:        .|||...:     ....:.|.|.......:.:...||...||..|:
Zfish   616 --------EQT--------LSKQTYHK-----ETRNSWDSPAFSNDIIRKRHYRIGLNLFNKKPE 659

  Fly   412 KGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEK-NDFNEDVLKAFVALHDFTNLILV 475
            |||:||:|...:...|..|||||.:.:||::..||::||.: ..||.|||...|...||:.:.|.
Zfish   660 KGIQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAMELD 724

  Fly   476 QALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDI---FTNTDTCYVLSFAIIMLNTSLHNPS 537
            :|||:|....|:.|||||::|::|.|:||||..||.:   |.|.||.::|:||||:|||.:::|:
Zfish   725 EALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPN 789

  Fly   538 VKD--KPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFKIPQD 582
            ||.  |..::.|:...||:::|.|:||.:|..:||.||....|..:|
Zfish   790 VKPERKMKLEDFVKNLRGVDDGEDIPREMLVGIYERIRKRELKTNED 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 79/185 (43%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
iqsec1bXP_005169390.2 Sec7 643..831 CDD:279680 79/187 (42%)
PH_IQSEC 868..998 CDD:270128
Hep_59 985..>1039 CDD:284467
MTBP_C <1028..>1126 CDD:291581
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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