DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment step and iqsec1

DIOPT Version :9

Sequence 1:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_001107304.1 Gene:iqsec1 / 100135093 XenbaseID:XB-GENE-997008 Length:1001 Species:Xenopus tropicalis


Alignment Length:524 Identity:142/524 - (27%)
Similarity:235/524 - (44%) Gaps:128/524 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SNSTFYVNTQNVSSAVFKDNRQPLLERGSGSDSSPSSVCVRCSCNSITKSGDRNETPTMATPKSD 140
            |:.|.|::.:.:|        .||                     .:::||||       ||.::
 Frog   184 SDVTLYIDEEELS--------PPL---------------------PLSQSGDR-------TPSTE 212

  Fly   141 IKIALKPPPKPRSPSMAPYTSVATYNITKLAPDSPPPASPTLSTQTVNCSDVTTKVTEVQRLPCD 205
            .::.|      ||.:...|.|: |:...||..|:...::|:|     :|.|..:::..:..|..:
 Frog   213 SELRL------RSMNSQEYWSM-THKEDKLDTDTSCRSTPSL-----DCQDHRSRIDHLPLLTIE 265

  Fly   206 EPNTELI--SKRTEYKHTTITTTTRTLIVSRPVELLLNENG------EIIARRSPRKSRSNSLGR 262
            .|:...:  |.|:|.     .:..|..:..|.:.   |:.|      .|..:..||:        
 Frog   266 PPSDSSVDLSDRSER-----GSVKRQNVYERGIP---NQQGSPKHIPHIPTKILPRE-------- 314

  Fly   263 MLDVQNEIGTGGLFMEADPCSKNSLPPPPYIDDMRFIDDSSNSQSESERNSNIHKTNKYTSKNNN 327
                           |..|..:    |.| ||....|:.:.|.||:||.:.:....:...|.:|:
 Frog   315 ---------------EEQPRHR----PRP-IDAQLIINGTINRQSKSESDYSDGDNDSINSTSNS 359

  Fly   328 NDS---KRESQQSNLCESCRMLLDRNYINTEQSDNLVILRRPSKQIKDELCEVVSEMEALDVPED 389
            ||:   ..||.:.:|.|  :.|..:.|               .|:.::          :.|.|..
 Frog   360 NDTINCSSESSRDSLRE--QTLSKQTY---------------HKETRN----------SWDSPAF 397

  Fly   390 CKHSNKDKQMSIGRKKFNMDPKKGIEYLVENRLLRHDPQDVAHFLYKGEGLNKTAIGDYLGEK-N 453
            .....:.:...||...||..|:|||:||:|...:...|..|||||.:.:||::..||::||.: .
 Frog   398 SNDVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQK 462

  Fly   454 DFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMETFAQRYCQLNPDI---FTN 515
            .||.|||...|...||:.:.|.:|||:|....|:.|||||::|::|.|:||||..||.:   |.|
 Frog   463 QFNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRN 527

  Fly   516 TDTCYVLSFAIIMLNTSLHNPSVKD--KPTVDQFISMNRGINNGGDLPRGLLESLYESIRTEPFK 578
            .||.::|:||||:|||.:::|:||.  |..::.|:...||:::|.|:||..|..:||.|.....|
 Frog   528 PDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPRETLVGIYERIHKRELK 592

  Fly   579 IPQD 582
            ..:|
 Frog   593 TNED 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stepNP_001036375.2 Sec7 397..577 CDD:279680 78/185 (42%)
PH_GRP1-like 592..710 CDD:269954
PH 596..708 CDD:278594
iqsec1NP_001107304.1 Sec7 403..591 CDD:279680 78/187 (42%)
PH_IQSEC 628..758 CDD:270128
Hep_59 745..>799 CDD:284467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.