DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and Adamtsl2

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_084257.1 Gene:Adamtsl2 / 77794 MGIID:1925044 Length:957 Species:Mus musculus


Alignment Length:1195 Identity:220/1195 - (18%)
Similarity:303/1195 - (25%) Gaps:652/1195 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NWTSPKIWAALFVTTLCLLDTQAAWAKKLNASQAFDDTWNTASDLENELEQQKRSKVQSAGGGGG 70
            :|.    |:.|.|..:      |..|....||    |...|::.||                 ||
Mouse     9 HWA----WSLLAVAVV------AGGAAPTEAS----DNSPTSNSLE-----------------GG 42

  Fly    71 AGGGPGQWSSWSDWSTCSRTCDGGIMHQMRRC------GSPG----SCRGESTRYRICNMQPC-P 124
            |......|..|:.|:.|||:|.||:..|.|.|      ..||    :|.|.|.||::|.:|.| |
Mouse    43 ADTTAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGTGNRTCVGTSKRYQLCRVQECPP 107

  Fly   125 EQQDFRSSQCSAYNDVPYDGTLYKWTPHY--DYV----EPCALTCRGHPAHLVEDISRETGDGNA 183
            :.:.||..||.::|...|||..|:|.|.|  |||    :||.|.|             .|.||..
Mouse   108 DGRSFREEQCVSFNSRVYDGRAYQWKPLYPDDYVHISSKPCDLHC-------------STVDGQR 159

  Fly   184 EEAEHYDEQSVIVQLSARVQDGTRCRSGSL-DMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGN 247
                         ||:...:|||.|:...| .:|:.|||:.:|||..:.||..:|.||||.|||:
Mouse   160 -------------QLTVPARDGTSCKLTDLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGS 211

  Fly   248 SCS-------------------------------------------------------------- 250
            ||:                                                              
Mouse   212 SCTHVTGNYRKGNNHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGFYFFNGNYKVDSPKN 276

  Fly   251 ----------------------------------------------------------------- 250
                                                                             
Mouse   277 FNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQSPHMHHLPP 341

  Fly   251 ----------------------------------------------------QP----------- 252
                                                                ||           
Mouse   342 VYYSFSEAASQSTESTERQELDSARLLGFMQHNGSLYRQTSSERLGLNSQLFQPPAPEVELGPSR 406

  Fly   253 ----------------------------------------------------------------- 252
                                                                             
Mouse   407 GQESNEVCKQASGGVCEGPPRGKGFQDHNATGRAFSADKDDREISAHFTSHELLSANTISDQLLG 471

  Fly   253 ----------------------------------------------------------------- 252
                                                                             
Mouse   472 TGSESEEFSLNETMNSIFAQGAPRSSPAESLYVDYEENEGPAAYLINGSYLELSSDRINTSSEAP 536

  Fly   253 ----------------------------------LFNWEMAPMSQCSVTCGSGYKMSRPICRNRL 283
                                              ::.|:::....||.||.:|...:..:| .|.
Mouse   537 FPNTSASPPNLAGNRTHKARTRPKARKQGVSPADMYRWKLSSHEPCSATCTTGVMSTYAMC-VRY 600

  Fly   284 TNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWSTCSRLCGHGYRERMVVCAEE-SNGIKT 347
            ...:|||:.|....|||...|.|....|.|||....||.|||.||.|::.|:|.|.:. |.|..:
Mouse   601 DGVEVDDSYCDALTRPEPVHEFCAGRECQPRWETSSWSECSRTCGEGHQFRIVRCWKMLSPGFDS 665

  Fly   348 RVADIMCRTP---KPPTQETCIIEEC-PHWEVEDWTGCSVSCGQ-GIQMRGVECKSTDGSLSAKC 407
            .|...:|...   :|..::||....| |.||:.:|:.|:..||: .:..|.:.| |.|..|   |
Mouse   666 SVYSDLCEATEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRC-SEDEKL---C 726

  Fly   408 DPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDADEDNEDENDEGDDVD 472
            ||.|||...:.| ||..|                       :||...||                
Mouse   727 DPSTKPVGEKNC-TGPPC-----------------------DRQWTVSD---------------- 751

  Fly   473 DLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPSL 537
                                                                             
Mouse   752 ----------------------------------------------------------------- 751

  Fly   538 DPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCEGKKPHDEVERCVEDPCML 602
                     |.|||.:||:|...|...||                                    
Mouse   752 ---------WGPCSGSCGQGRTIRHVYCK------------------------------------ 771

  Fly   603 PSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELIINCVREDNGRVVSPFLCS 667
                                            ||                    :||||....|.
Mouse   772 --------------------------------TS--------------------DGRVVPESQCQ 784

  Fly   668 PETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTREVQCIHEVTRGGDNTMVVPNSMCPQ 732
            .||||.| :..|.|:.||..|...|:..|:.:||.|:|.|.|.|: |:..|.......|.....:
Mouse   785 TETKPLA-IHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCM-ELANGKPQIRSGPECGLAR 847

  Fly   733 PPPADRQYCNVLDCPVRWEVGEWSKCSHTCGYGFKDRKVECKQIMAQEHKIERPESMCPSAKPAD 797
            .|| :...|....| .:|....||:|:.|||.|.:.|.|:|.|      ..:......|..||..
Mouse   848 KPP-EESTCFERPC-FKWYTSPWSECTKTCGVGVRMRDVKCYQ------GTDIVRGCDPLVKPVG 904

  Fly   798 KKPCNVKPCPPEDPKPVIQINNSTH 822
            ::.|:::|||.|.|....|....|:
Mouse   905 RQACDLQPCPTEPPDDSCQDQPGTN 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 22/56 (39%)
TSP1 546..600 CDD:214559 10/53 (19%)
TSP1 750..807 CDD:214559 17/56 (30%)
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
Adamtsl2NP_084257.1 TSP1 50..106 CDD:214559 21/55 (38%)
ADAM_spacer1 216..330 CDD:368694 0/113 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..568 0/35 (0%)
TSP1_ADAMTS 632..691 CDD:408800 19/58 (33%)
TSP1_ADAMTS 695..743 CDD:408800 20/52 (38%)
TSP1_ADAMTS 747..800 CDD:408800 26/231 (11%)
TSP1_ADAMTS 804..860 CDD:408800 16/57 (28%)
TSP1_ADAMTS 863..913 CDD:408800 16/55 (29%)
PLAC 922..953 CDD:400844 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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