DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and adamts8a

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_021332165.1 Gene:adamts8a / 569618 ZFINID:ZDB-GENE-060526-202 Length:940 Species:Danio rerio


Alignment Length:567 Identity:145/567 - (25%)
Similarity:203/567 - (35%) Gaps:187/567 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VNMNWTSPKIW---AALFVTTL-------CLLDTQA------------AWAKKLNASQAFDDTWN 45
            |::|.|.|  |   :||::|..       ||||...            .:.......|||.:.:.
Zfish   393 VHLNKTLP--WSPCSALYITEFFDNGHGDCLLDPPEMTIPLAAELPGHTFGLDQQCQQAFGNKYT 455

  Fly    46 TASDLEN-----ELEQQKRSKVQSAGGGGG---AGGGP--------------------------- 75
            ..|:...     :|..::..|:|.....|.   |.|.|                           
Zfish   456 HCSNAPADQTCVQLWCREEGKIQCTTRNGSLHWADGTPCGEDRRCREGLCLSSAMEEAGEQKVPV 520

  Fly    76 -GQWSSWSDWSTCSRTCDGGIMHQMRRCGSP----GS--CRGESTRYRICNMQPCPEQ--QDFRS 131
             |.|..|..|..|||||.||:....|.|.||    |.  |.|:..:|:.||.|.|||.  :.||.
Zfish   521 NGGWGEWGPWGPCSRTCGGGVEFSHRECTSPVPQNGGLYCVGQRVKYQSCNTQTCPEDHGKSFRE 585

  Fly   132 SQCSAYNDVPY---DGTLYKWTPHYDYVEP---CALTCRGHPAHLVEDISRETGDGNAEEAEHYD 190
            .||..||...|   .|.:.:|.|.|..|.|   |.|.||                     |:..:
Zfish   586 EQCEKYNSDRYMDIKGNIKQWIPKYSGVSPRDRCKLVCR---------------------AKGSN 629

  Fly   191 EQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCSQ---- 251
            |..|   ..|:|.|||.|...:..:|:||:|.:.|||..|||.:|:|.|.||||||.:|.:    
Zfish   630 EFKV---FEAKVVDGTTCGPDTTSICVQGQCIKAGCDQVIGSNEKLDKCSVCGGDGTTCRKISGS 691

  Fly   252 --------------PL------------------------------------FNWEMAPM----- 261
                          |.                                    |:..||..     
Zfish   692 LNKATIGYIDIVTIPAGATNIDIKQRSHRGIPHDGNYLAVKAQDGTYILNGNFSVSMAEQDVPVP 756

  Fly   262 ------SQCSVTCG---SGYKMSRPICRNRLTNA-DVDDTLCSVT---------NRPEASVEQCN 307
                  |..|.|..   |.:::..||....|:.| |:.......|         ::| .:..:.:
Zfish   757 GAMLRYSGSSTTLERLLSFHRLQEPITIQLLSTAGDISPPRIKYTFFLPRDVPFSKP-GTESRIS 820

  Fly   308 THSCPP----RWIADDWSTCSRLCGHGYRERMVVCAEESNGIKTRVADIMCRTPKPPTQETCIIE 368
            ||...|    .|:..:||.||:.||.|:..|.|.| .:..|..:.:.|...|   |.....|...
Zfish   821 THVISPFGGFDWVLGEWSECSKSCGAGWSRRSVEC-RDGEGSLSYLCDADLR---PADIRPCGDL 881

  Fly   369 ECPHWEVEDWTGCSVSCGQGIQMRGVECKSTDGSL--SAKCDPLTKP 413
            .||.|::..|:.||.:||.|.:.|.|.|....|.:  ..||:|..:|
Zfish   882 PCPMWQMGPWSACSRTCGPGERHRTVVCLDYAGKVLEPQKCNPDKRP 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 21/51 (41%)
TSP1 546..600 CDD:214559
TSP1 750..807 CDD:214559
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
adamts8aXP_021332165.1 Pep_M12B_propep 37..167 CDD:307618
ZnMc_ADAMTS_like 217..422 CDD:239801 9/30 (30%)
TSP1 533..576 CDD:214559 18/42 (43%)
ADAM_spacer1 686..805 CDD:310520 14/118 (12%)
TSP1 832..884 CDD:214559 16/55 (29%)
TSP1 885..926 CDD:214559 14/40 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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