DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and adamts10

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_001116746.1 Gene:adamts10 / 564734 ZFINID:ZDB-GENE-081104-414 Length:1108 Species:Danio rerio


Alignment Length:839 Identity:191/839 - (22%)
Similarity:267/839 - (31%) Gaps:358/839 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GGPGQWSSWSDWSTCSRTCDGGIMHQMRRCGSPGS------CRGESTRYRICNMQPCP-EQQDFR 130
            |..|.|..||.|..|||||.||:...:|.|.||..      |.||..|:|.||:..|| ..||||
Zfish   550 GVDGGWGHWSPWEECSRTCGGGVSSSIRHCDSPRPTVGGKYCLGERKRFRSCNIDECPVGSQDFR 614

  Fly   131 SSQCSAYNDVPYDGTLYKWTPHY-DYVEPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQSV 194
            ..|||.::.||:.|..|.|.|:. ..|:.|:|.|.                  ||....|.|:  
Zfish   615 EIQCSDFDSVPFRGKFYTWKPYRGGGVKSCSLNCL------------------AEGYNFYTER-- 659

  Fly   195 IVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS--QPLFNWE 257
                :..|.|||.||..|||:|:.|:|:.||||..:||..:.|.|.||||||:||.  :.:||..
Zfish   660 ----APAVVDGTPCRDDSLDVCVNGECKHVGCDRILGSDVREDRCRVCGGDGSSCQVIEGVFNDS 720

  Fly   258 MAPMSQCSVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASV----EQCN----------- 307
            ::.         .||:                    .|...|:.||    ::.|           
Zfish   721 LSE---------GGYE--------------------EVVRIPKGSVFIHIQELNISLNYLVLKSK 756

  Fly   308 ----------THSCPPRWIADDWSTCSRLCGHGYRER---------------------MVVCAEE 341
                      |...|.|:         .:.|..:..|                     ||:..||
Zfish   757 GDQYFINGKLTIDTPRRF---------DIAGGTFHYRRPANEPETLEALGPTNMTLIVMVLVREE 812

  Fly   342 SNGIKTRVADIMCRTPKPPTQETCIIEECPHWEVEDWTGCSVSCGQGIQMRGVECKSTDGSLSAK 406
            :.||..|....:.|.|.....          |....|:.||..|..|:|::.|.||         
Zfish   813 NPGILYRFNPPVSRDPLSSYS----------WHYTSWSRCSALCAGGVQVQQVVCK--------- 858

  Fly   407 CDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDADEDNEDENDEGDDV 471
                                                                             
Zfish   859 ----------------------------------------------------------------- 858

  Fly   472 DDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPS 536
                           ..||..::|.|                                       
Zfish   859 ---------------KQADLSVVYNH--------------------------------------- 869

  Fly   537 LDPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCEGK-KPHDEVERCVEDPC 600
                                                         .|:.| ||.|:...|.::||
Zfish   870 ---------------------------------------------FCDKKNKPKDKKRPCNQEPC 889

  Fly   601 MLPSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELIINCVRE---DNGRVVS 662
                                 .|    .|....::.||.||.|||....:.|.|:   ...:|:.
Zfish   890 ---------------------PP----TWWTGDWSECSRSCNGGVRTREVLCKRKMSVTEEKVLD 929

  Fly   663 PFLCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTREVQCIHEVTRGGDNTMVVPN 727
            ...|: .|:|.. ...||:..|||.|:..|::.|:..||.|.:.|.:.|     |.|||...:|.
Zfish   930 DTACT-TTRPSV-TEPCNNHTCPPEWHALDWSECTPGCGPGYRYRVILC-----RSGDNGETLPE 987

  Fly   728 SMCP-QPPPADRQYCNVLDC-PVRWEVGEWSKCSHTCGYGFKDRKVECKQIMAQEHKIERPESMC 790
            |.|| |..|..|..||:..| |.:|..|.|.:||..||.|.:.|.|:|.....|      |.:.|
Zfish   988 SECPKQSRPTTRVRCNIQRCPPPQWVAGPWGECSARCGMGQEIRFVQCLTHTGQ------PSNEC 1046

  Fly   791 P-SAKPADKKPCNVKPC----PPEDPKPVIQINNSTHIQHDPKKTKITLKVGGAGLVFF 844
            | |.:||..:.|..| |    |.::|:....:|.   :.:.|    :.|:....|..:|
Zfish  1047 PESHRPAFMQQCKSK-CDHSGPTDNPEECKDVNT---VAYCP----LVLRFKFCGRAYF 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 22/51 (43%)
TSP1 546..600 CDD:214559 6/54 (11%)
TSP1 750..807 CDD:214559 21/61 (34%)
IGc2 845..902 CDD:197706 191/839 (23%)
PLAC 1355..1384 CDD:285849
adamts10NP_001116746.1 Pep_M12B_propep 71..189 CDD:279848
Reprolysin 244..462 CDD:279729
ZnMc_ADAMTS_like 244..459 CDD:239801
TSP1 555..607 CDD:214559 22/51 (43%)
ADAM_spacer1 711..823 CDD:283607 21/149 (14%)
TSP1 893..950 CDD:214559 16/58 (28%)
PLAC 1074..1106 CDD:285849 5/31 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11660
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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