DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and paplna

DIOPT Version :10

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:1355 Identity:277/1355 - (20%)
Similarity:398/1355 - (29%) Gaps:598/1355 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 WSSWSDWSTCSRTCDGGIMHQMRRC-----GSPGSCRGESTRYRICNMQPCPE-QQDFRSSQCSA 136
            |..||.:..|||:|.||:..:.|||     ....||.|....||.||:|.||| .:|||..|||.
Zfish    24 WGEWSSYGECSRSCGGGVTMRTRRCVTHRTDGGHSCVGPDKSYRSCNIQDCPEGSRDFREEQCSQ 88

  Fly   137 YNDVPYDGTLYKWTPHYDYVEPCALTC--RGHPAHLVEDISRETGDGNAEEAEHYDEQSVIVQLS 199
            ::...:.|..|||.|:|....||.|.|  ||                   |..:|.::|.:|   
Zfish    89 FDGTDFQGKRYKWLPYYGGENPCELNCIPRG-------------------ENFYYRQKSSVV--- 131

  Fly   200 ARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS-------------- 250
                |||.||.|..|:|:.|.|:|:|||..:.|.::.|.|..|||||.|||              
Zfish   132 ----DGTPCRPGGKDICVDGLCKRLGCDHMLESPQEEDACLQCGGDGQSCSRLKNSFSMRNLPKG 192

  Fly   251 ----------------------------------------------------------------- 250
                                                                             
Zfish   193 YNQMFIIPVGATTISIKETLPTRNYLAIKNLRGEYYLNGHWVIDLSRAASIAGTVLHYQRGREGE 257

  Fly   251 -------------QPL---------------------------FNWEMAPMSQCSVTCGSGYKMS 275
                         :||                           :.|.....|.||..|||||:..
Zfish   258 KSPEMITGRGPTTEPLVIELITQEVNEGVDYEYYLPNGGSTEGYYWSYGSWSACSKECGSGYQSR 322

  Fly   276 RPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCP-------------------PR------- 314
            ...|  ...:....|.||:...|| .|...||...||                   ||       
Zfish   323 LVFC--TFEDEAYSDYLCASLPRP-LSNRTCNEQQCPQTRRMAYVYEAQLWRPTETPRVYVQVYS 384

  Fly   315 WIADDWSTCSRLCGHGYRERMVVC-AEESNGIKTRVADIMCR--TPKPPTQETCIIEECPHWEVE 376
            |.|.:||.|...||.|.:.|.|.| :.:|.|.:. |.|..|.  ||:|.:|:.|.:::|..:.:.
Zfish   385 WTAGEWSPCPVTCGGGLQARRVECMSHDSTGSRL-VEDSQCTAYTPRPLSQQNCNMQKCAQYSIY 448

  Fly   377 DWTGCSVSCGQGIQMRGVECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSS 441
            .|:.|||:||.|.|.|.|.|..:||:                                       
Zfish   449 SWSQCSVTCGSGKQTRDVVCIGSDGA--------------------------------------- 474

  Fly   442 RSLNERSERQLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQE 506
                                        .|:|...|                          || 
Zfish   475 ----------------------------SVEDYACG--------------------------NQ- 484

  Fly   507 APDEPRTMHLMNGNSNNNFNRGEDESEGPSL-DPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLE 570
             |..||                |...|.|.. .|......:|..||.:||.|:|.|...|.   :
Zfish   485 -PKPPR----------------EQICEMPMCRSPIAWHIGDWGLCSKSCGSGLRERQVICS---D 529

  Fly   571 YSRTVATVNDSLCEGKKPHDEVERCVEDPCMLPS---------------HGF----DD---QFPR 613
            ..|.:....:  |:||.....||.|...||..|.               |||    :|   :.|:
Zfish   530 RQRNLYRAEE--CQGKPKPPTVESCNAQPCYRPQEVPSMQDPTGHDNTLHGFMPYSEDPLLEIPQ 592

  Fly   614 DS----------------IKVGVSEPGKTYVW--------REQGYTSCSASCLGGVEELIINCVR 654
            ::                .:.|....|:|...        ::||..||:.|..|        |..
Zfish   593 NNAAHSPHGTALTPHCSQTQYGCCPDGRTPASGPQHQGCPQDQGQPSCTWSRYG--------CCH 649

  Fly   655 EDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNY----SDYTPCSKSCGIGIKTREVQCIHEV 715
            :  |..|:              :..|...||..|.:    ||..|   |..:...:....|.::.
Zfish   650 D--GVTVA--------------QGQNMEGCPDAWTHWSSSSDTVP---SAPVDCHSSTYGCCYDG 695

  Fly   716 TRGGDNTMVVPNSMCPQPPPADRQYCNVLDCPVRWEVG---EW----------SKCSHTCGYG-- 765
            ......|   ....|..||...::   .|.|.:...||   :|          |:|.| ..||  
Zfish   696 VTAASGT---HGEGCSNPPSNTQR---SLSCDLPNTVGPCDQWTSRFYFDRSASRCLH-FWYGGC 753

  Fly   766 ------FKDRKVECKQIMAQE-------------------------------HKIERPESMCPSA 793
                  |...: ||:::..:.                               |:.:|......:|
Zfish   754 HGNSNNFASEE-ECQKMCLRSELRQRDQAHVLSLQHGRRRFPAHVQLSSSGAHRAQRAHQPASNA 817

  Fly   794 ----KPA----------DKK---------------PCNVKPCP-------------PEDP-KPVI 815
                .||          ||.               ||.|.|.|             |.|| :...
Zfish   818 MQQSNPAASWTAEGVSIDKTDPSTVEGLVGQRVVLPCRVTPPPSSAVLVEWRRDGVPVDPTRHEQ 882

  Fly   816 QINNSTHI---------------QHDPKKTK--ITLKVGG-----AGL----------------- 841
            |::.|..:               ..|.|:..  |.|.|.|     ||:                 
Zfish   883 QLDGSLLVGPITLQDSGWFLCVATRDDKRDHRYIYLSVSGSSQNNAGISEVDSSQSYTSQSSSRF 947

  Fly   842 ---------VFFGTQVKIKC---PVKRYNRTKIKWSKDHKPLQRSRKYKVSKKGALRILDITFRD 894
                     ...|...|::|   ||...:...|.||:..:|| .|.::.....|.|.|..:|..|
Zfish   948 NIDYSPLVEARAGQTAKLQCSVLPVSAIHAVTIHWSRAGQPL-NSLRHSQHSDGTLVIKQLTADD 1011

  Fly   895 AGVYSC-------------------HAGLSSAEISIEVKAKPGQQIEELEQQETERLVREKSGT- 939
            :|:|:|                   ...::.|.|.::|......|:..:...|...:...::|. 
Zfish  1012 SGLYTCTVTDAQKFEERQVQLRVLGDLRITKAPIDVDVVQGSTAQLACVVTGENVNVGWSRNGVP 1076

  Fly   940 ------EALTSAD-------MKSAD-GTGTSTAVGPNSHVNGSAQQHGSRRRQQQSERLQNGRER 990
                  ....|||       ::|.| ||.|..|......|:.:|:...::..||.          
Zfish  1077 VRPDGHRVHVSADGTLILNNVQSVDEGTYTCNAYTGTLSVSAAAEIRLAKTPQQD---------- 1131

  Fly   991 SRRPKSDGVQHADSSIMEDDLSQLVQSEDRIPQPASASSGGSRTRTLLAMPYFQA 1045
                 .||.|.:              |.|.:.||..|:........|.:.||:.:
Zfish  1132 -----IDGGQFS--------------SSDCVDQPELANCKLIVYARLCSSPYYSS 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 20/50 (40%)
TSP1_ADAMTS 256..311 CDD:465950 18/54 (33%)
TSP1_ADAMTS 315..370 CDD:465950 21/57 (37%)
TSP1_ADAMTS 373..420 CDD:465950 13/46 (28%)
TSP1 546..600 CDD:214559 16/53 (30%)
TSP1_ADAMTS 629..684 CDD:465950 10/62 (16%)
TSP1_ADAMTS 688..746 CDD:465950 11/61 (18%)
TSP1_ADAMTS 750..806 CDD:465950 21/136 (15%)
Ig 845..914 CDD:472250 21/90 (23%)
Ig strand B 848..852 CDD:409353 1/3 (33%)
Ig strand C 861..865 CDD:409353 1/3 (33%)
Ig strand E 883..887 CDD:409353 2/3 (67%)
Ig strand F 897..902 CDD:409353 2/23 (9%)
TSP1_ADAMTS 1157..1227 CDD:465950
TSP1_ADAMTS 1289..1343 CDD:465950
PLAC 1355..1384 CDD:462560
paplnaXP_005169942.1 TSP1 24..75 CDD:214559 20/50 (40%)
ADAMTS_CR_3 80..177 CDD:437068 44/122 (36%)
ADAMTS_spacer1 181..293 CDD:461796 2/111 (2%)
TSP1_ADAMTS 303..355 CDD:465950 18/54 (33%)
TSP1_ADAMTS 385..442 CDD:465950 21/57 (37%)
TSP1_ADAMTS 450..498 CDD:465950 24/158 (15%)
TSP1_ADAMTS 504..557 CDD:465950 16/57 (28%)
Kunitz_papilin 720..770 CDD:438678 12/51 (24%)
Ig_3 839..906 CDD:464046 10/66 (15%)
Ig 959..1034 CDD:472250 19/75 (25%)
Ig strand B 963..967 CDD:409353 1/3 (33%)
Ig strand C 979..983 CDD:409353 1/3 (33%)
Ig strand E 1000..1004 CDD:409353 2/3 (67%)
Ig strand F 1014..1019 CDD:409353 2/4 (50%)
Ig strand G 1027..1030 CDD:409353 0/2 (0%)
Ig 1039..1121 CDD:472250 16/81 (20%)
Ig strand B 1055..1059 CDD:409353 1/3 (33%)
Ig strand C 1067..1071 CDD:409353 0/3 (0%)
Ig strand E 1090..1094 CDD:409353 0/3 (0%)
Ig strand F 1104..1109 CDD:409353 2/4 (50%)
Ig strand G 1115..1118 CDD:409353 1/2 (50%)
PLAC 1142..1173 CDD:462560 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.

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