DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and thsd7aa

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_009292626.1 Gene:thsd7aa / 557991 ZFINID:ZDB-GENE-060503-709 Length:1702 Species:Danio rerio


Alignment Length:1510 Identity:302/1510 - (20%)
Similarity:458/1510 - (30%) Gaps:576/1510 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 SQPLFNWEMAPMSQC-SVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRP---EASVEQCNTHS 310
            ::|.:.|:..|..:| ...||.|...||.:............|.|..:.||   ::....|:.|.
Zfish    42 TRPTYIWQTGPWGRCMGSECGPGGSQSRAVWCAHSEGWTTLHTNCQQSERPSNQQSCFRVCDWHK 106

  Fly   311 CPPRWIADDWSTC----SRLCG-----------HGYRERMVVCAEESNGIKTRVADIMCR--TPK 358
            ....|....|:.|    .|..|           .|.:.|.|.|..:|:|:...  |.:|.  .||
Zfish   107 ELYDWQLGAWNQCVPVSMRNAGVPRPAVCTRGEEGIQTREVGCVHKSDGVPAE--DAICEYFEPK 169

  Fly   359 PPTQETCII---EECPHWEVEDWTGCSVSCGQGIQ--MRGVECKSTDGSLSAKCDPLTKPGSMQQ 418
            |..::.|:|   .:|...|...||.||.|||.|:|  :|.|......|  .:.|..||:   .:.
Zfish   170 PRLEQACLIPCPRDCVVSEFSPWTSCSKSCGMGLQNRLRSVLAPPLFG--GSACPNLTE---FRT 229

  Fly   419 CSTGIHCGG--SLN--KVG--GTIIVG-------------------SSRSLNERSERQLDSSDAD 458
            |..| .|.|  ||:  :||  |..:..                   :.|....|.|||.......
Zfish   230 CQPG-KCEGVESLHSLRVGPWGQCMASPIRQARDTGEARVPKAERKAKRDRQARQERQGKRRKNK 293

  Fly   459 EDNEDENDEGDDV----------DDLESGQ--------DTDDGEGLSYADQPLLY-------AHR 498
            |..|....:|:.|          .|.|:.:        :..:.:||.:.|..:.|       .||
Zfish   294 EKKELRESKGERVRERVKEKKRMRDPETRELIKKKRTRNRQNRQGLKFWDLQVGYQTREVTCVHR 358

  Fly   499 ----------TQSRL------------------------NQEAPDEPRTMHLMNGNSNNNFNRGE 529
                      ||..|                        ::|..|       :||.........:
Zfish   359 SGSTASISQCTQQTLPVTYQACVISKDCEVSEWSDWSVCSKECYD-------LNGRKGQRTRTRQ 416

  Fly   530 ---------------DESE-----GPSLDPTYI---KDNEWSPCSV----------------TCG 555
                           :|||     |..:.|..:   :..|||.|.|                .||
Zfish   417 VQQFPVGGGAECPELEESEPCSPQGEGIPPCVVYNWRSTEWSDCRVDVLLSQQDRRRSNQTGLCG 481

  Fly   556 EGIRRRTYNCKI----------FLEYSRTVATVNDSLCEGKKPHDEVERC-----VE-------- 597
            .|::.|...|..          .|:....:..||..||.| .||:..:.|     ||        
Zfish   482 GGVQTREVYCVQAPSETSSNLGSLKSKDALRPVNSDLCLG-VPHNTTQLCHIPCPVECEVSAWSA 545

  Fly   598 -DPCMLPSHGFDDQFPRDSIKVG----VSEP-GKT-----------------YVWREQGYTSC-- 637
             .||..  ....||..:...|:.    ::|| |.|                 |.|.......|  
Zfish   546 WGPCTF--ENCQDQSTKKGFKLRKRKIMNEPTGGTGNCPHLTEAIPCEEPSCYDWLLVKLEECVP 608

  Fly   638 --SASCLGGVEELIINCVRED-------------------------NGRVVSPF----LCS---- 667
              ...|..|.:...:.|:..|                         ...|:||:    |||    
Zfish   609 DNDKVCGPGTQNPQVQCINSDGEFVDRQLCRDAILPMPVLCEVSCPKDCVLSPWTSWSLCSNTCS 673

  Fly   668 --------------------------PETKPEARVRTCNDRPCPP-RWNYSDYTPCSKS------ 699
                                      |.:.....||:|||.||.. .|....:..|.:.      
Zfish   674 GKNSEGKQTRARSILAYNAGDGGVQCPNSSALQEVRSCNDHPCTVYHWQTGPWGQCIEDTSVPSA 738

  Fly   700 -----------------CGIGIKTREVQCIHEVTRGGDNTMVVPNSMCPQ--------------- 732
                             |.:|::||:|.|:..      |...||...||:               
Zfish   739 NSSISRAVPGTAVNDAFCSVGMQTRKVICVRV------NVGQVPPKKCPESLRPETVRPCLLPCK 797

  Fly   733 -----PPPADRQYCNVL--------------------------DCP-----------------VR 749
                 .|.:|...|..:                          |||                 .|
Zfish   798 RDCVVTPYSDWTPCPSICQTGGSVKKKQSRKRIIIQLPANGGQDCPEVLFQEKDCDASSVCPGYR 862

  Fly   750 WEVGEWSKC--------------SHTCGYGFKDRKVECKQIMAQEHKIERPESMCPSAKPADKKP 800
            |:..:|.:|              ..|||.|.:.|.|.||::                    |..|
Zfish   863 WKTHKWRRCQLVPWSIRQDSPGAQETCGPGLQARAVSCKKL--------------------DSGP 907

  Fly   801 CNVKPCPPEDPKPVIQINNSTHI--QHDPKKTKITLKVGGAGLVFFGTQVKIKCPVKRYNRTKIK 863
            .:|..| .:...|:.|:..|..:  |.|.:.|..:.         |.|.......|:...||.:.
Zfish   908 ADVAAC-LKFAGPMPQLTQSCQLPCQDDCQLTAWSK---------FSTCAADCVGVRTRKRTLVG 962

  Fly   864 WSKDHKPLQRSRKYKVSKKGALRILDITFRDAGVYS-C------HAGLSSAEISIEVK-AKPGQQ 920
            .||..:..:.::.|.:|:...........:..|.:| |      ..||...::..::| ...|.:
Zfish   963 KSKKREQCKNTQMYPLSETQYCPCNKYNAQPVGNWSDCILPEGRVEGLLGMKVQGDIKECGQGYR 1027

  Fly   921 IEEL---EQQ----ETERLVREKSGTEAL---TSADMKSADGTGTSTAVGPNSHVNGSAQQHGSR 975
            .:.:   :|.    ||.|........||.   ..:|.|.::.:..|..    |...||..:   .
Zfish  1028 YQAMVCYDQDNRLVETSRCNSHGYIEEACIIPCPSDCKLSEWSNWSRC----SKSCGSGVK---V 1085

  Fly   976 RRQQQSERLQNGRERSRRPKSDGVQHADSSIME-----DDLSQLVQSEDRIPQPASASSGGSRTR 1035
            |.:...|:..||....  ||.|.|..|  .:.|     .|.||.|                    
Zfish  1086 RSKWLREKPYNGGRPC--PKLDHVNQA--QVYEVVPCLSDCSQYV-------------------- 1126

  Fly  1036 TLLAMPYFQALLSNLQLLWPLQRFKDSRGQHLLQGEALKFGIDLSGKDFDQDESERVPAEQLPPE 1100
             .:|.|:....:||:.|       |::.|:          |:          ::.:|...|   .
Zfish  1127 -WVAEPWSVWKVSNVDL-------KENCGE----------GV----------QTRKVRCMQ---N 1160

  Fly  1101 VLHSPSDP--EY----HEPSKSGPEADVPHVPPHMPHARW------------------------- 1134
            .:..||||  :|    .|......|:.:| .|.......|                         
Zfish  1161 TVDGPSDPVEDYLCDPEEMPLGARESKLP-CPEDCVLTDWGSWSRCPLPCNVNSTRQRSASPIRQ 1224

  Fly  1135 --ETGAAASTT--AVPSLPNDGFVYRWMLGEWSQCS-QECGAAGSGLQRRTVSCQRAAKATSSGS 1194
              |.....|||  .:.:|.::.|.|.:.:.:||.|. .|....|.|.:.|.:.|.|         
Zfish  1225 PSERKQCPSTTEKEICTLNSNCFHYSYNITDWSTCQLSERAVCGVGFKTRMLDCVR--------- 1280

  Fly  1195 TSDTENNVVDNSECFAHGLELP-EFFQSCGNEACP------QWSKGDWTPCQRSHCHGRNTAMQR 1252
             ||:::  ||...|...|||.. :...||..| ||      .||  .|:.|  ||..|....:.|
Zfish  1281 -SDSKS--VDLKFCEELGLEKKWQMNASCVVE-CPVNCQLSDWS--SWSEC--SHTCGLAGKLWR 1337

  Fly  1253 REVTCRYPNGTEGSICD---EYERPAMRQECYNERCEGVWRVEPWSEC---NAPCGRKGIKYRIL 1311
            |....:...| :|..|.   |..:|...:.|::      ||...||.|   .|.|| :|:::|.:
Zfish  1338 RRTVIQASQG-DGRPCSSQLEQWKPCPVKPCFS------WRYSVWSPCKSEGARCG-EGLRFRNV 1394

  Fly  1312 QC-VWYGSRRPAGNV 1325
            .| |..||.:.||::
Zfish  1395 SCFVSDGSGKDAGSM 1409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559
TSP1 546..600 CDD:214559 21/93 (23%)
TSP1 750..807 CDD:214559 14/70 (20%)
IGc2 845..902 CDD:197706 11/63 (17%)
PLAC 1355..1384 CDD:285849
thsd7aaXP_009292626.1 TSP1 186..236 CDD:214559 18/55 (33%)
TSP1 388..440 CDD:214559 7/58 (12%)
TSP1 660..716 CDD:214559 11/55 (20%)
TSP1 1067..>1105 CDD:214559 10/46 (22%)
TSP1 1317..1367 CDD:214559 14/54 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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