DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and Ppn

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster


Alignment Length:1339 Identity:297/1339 - (22%)
Similarity:459/1339 - (34%) Gaps:418/1339 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GGAGGGPGQWSSWSDWSTCSRTCDGGIMHQMRRC-----GSPGSCRGESTRYRICNMQPCPEQQ- 127
            ||.|..|.:|:.||..|.|||||.||:.:|.|.|     .....|.|.|.||..||.|.|||:: 
  Fly    51 GGEGNDPDEWTPWSSPSDCSRTCGGGVSYQTRECLRRDDRGEAVCSGGSRRYFSCNTQDCPEEES 115

  Fly   128 DFRSSQCSAYNDVPYDGTLYKWTPHYDYVEPCALTC--RGHPAHLVEDISRETGDGNAEEAEHYD 190
            |||:.|||.::...:||..|:|.|:.:...||.|.|  :|                   |..:|.
  Fly   116 DFRAQQCSRFDRQQFDGVFYEWVPYTNAPNPCELNCMPKG-------------------ERFYYR 161

  Fly   191 EQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS----- 250
            ::..:|       |||||....||:|:.|:|..||||:.:||..|.|.|..|||||::|.     
  Fly   162 QREKVV-------DGTRCNDKDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNT 219

  Fly   251 -------------------------------------------------------QPLF------ 254
                                                                   :|:|      
  Fly   220 ITTKDLAPGYNDLLLLPEGATNIRIEETVPSSNYLACRNHSGHYYLNGDWRIDFPRPMFFANSWW 284

  Fly   255 NWEMAPMSQCS---VTCGSGYKMSRPICRNRLTNADVDDTLCSVT---NRPEA-SVEQCNTHSCP 312
            |::..||...:   :||      |.||..:......|.:...|:.   :.||: |..|.:||:  
  Fly   285 NYQRKPMGFAAPDQLTC------SGPISESLFIVMLVQEKNISLDYEYSIPESLSHSQQDTHT-- 341

  Fly   313 PRWIADDWSTCSRLCGHGYRERMVVCAEESNGIK-TRVADIMC-RTPKPPTQETCIIEEC-PHWE 374
              |....::.||..||.|.:.|.|.|   :|.|. ..|...:| :..||..::.|..|.| |||.
  Fly   342 --WTHHQFNACSASCGGGSQSRKVTC---NNRITLAEVNPSLCDQKSKPVEEQACGTEPCAPHWV 401

  Fly   375 VEDWTGCSVSCG-QGIQMRGVECK--STDGSLSAKCDPL------TKPGSMQQCSTGIHCGGSLN 430
            ..:|:.||..|| .|.|.|.:.|:  |:.|..:.:.|.:      .||.:.|:|           
  Fly   402 EGEWSKCSKGCGSDGFQNRSITCERISSSGEHTVEEDAVCLKEVGNKPATKQEC----------- 455

  Fly   431 KVGGTIIVGSSRSLNERSERQLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLY 495
                                                                             
  Fly   456 ----------------------------------------------------------------- 455

  Fly   496 AHRTQSRLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPSLDPTYIKDNEWSPCSVTCGEGIRR 560
                    |::..:.|: .||                 ||           |:||...||:|.:.
  Fly   456 --------NRDVKNCPK-YHL-----------------GP-----------WTPCDKLCGDGKQT 483

  Fly   561 RTYNCKIFLEYSRTVATVNDSLCEGKKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGK 625
            |...|  |:|.:.....:.:..|..:||..| :.|:..||    .|.|                 
  Fly   484 RKVTC--FIEENGHKRVLPEEDCVEEKPETE-KSCLLTPC----EGVD----------------- 524

  Fly   626 TYVWREQGYTSCSASCLGGVEELIINCVREDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNY 690
               |....::.|:| |....|.....|..:: |:|.....|.||....:  |.|....|..:|..
  Fly   525 ---WIISQWSGCNA-CGQNTETRTAICGNKE-GKVYPEEFCEPEVPTLS--RPCKSPKCEAQWFS 582

  Fly   691 SDYTPCSKSCGIGIKTREVQCIHEVTRGG--DNTMVVP---NSMC-PQPPPADRQYCNVLD--CP 747
            |:::.||..||.|:|:|.|.|       |  |...|.|   :|.| .:..|...|.|...:  ||
  Fly   583 SEWSKCSAPCGKGVKSRIVIC-------GEFDGKTVTPADDDSKCNKETKPESEQDCEGEEKVCP 640

  Fly   748 VRWEVGEWSKCSHTCGYGFKDRKVEC-----KQIMAQEHKIERPESMCPSAKPADKKPCNVKPCP 807
            ..|..|.|.|||..||.|.:.|:|.|     |.:...|.|:|          |..:| ||.:.|.
  Fly   641 GEWFTGPWGKCSKPCGGGERVREVLCLSNGTKSVNCDEEKVE----------PLSEK-CNSEACT 694

  Fly   808 PEDPKPVIQINNSTHIQHDPKKTKITLKVGGAGLVFFGTQVKIKCPVKRYNRTKIKWSKDHKPLQ 872
            .::..|:...:..  |:.|.:    .....|..|:..|.....|             |:|...|:
  Fly   695 EDEILPLTSTDKP--IEDDEE----DCDEDGIELISDGLSDDEK-------------SEDVIDLE 740

  Fly   873 RSRKYKVSKKG-------------ALRILDITFRDAGVYSCHAGLSSAEISIEVKAKPGQQIEEL 924
            .:.|.:.:.:.             .......||..:| |...:...|. ||.|.....    ||.
  Fly   741 GTAKTETTPEAEDLMQSDSPTPYDEFESTGTTFEGSG-YDSESTTDSG-ISTEGSGDD----EET 799

  Fly   925 EQQETERLVREKSGTEALTSADMKSADGTGT----STAVGPNSHVNGSAQQHGSRRR----QQQS 981
            .:..|:......||:   ||:|..|:|.:.:    :|:..|.|.|:.|:....:...    ...|
  Fly   800 SEASTDLSSSTDSGS---TSSDSTSSDSSSSISSDATSEAPASSVSDSSDSTDASTETTGVSDDS 861

  Fly   982 ERLQNGRERSRRPKSD--------GVQHADSSIMEDDLSQLVQSEDRIPQPASASSGGSRTRTLL 1038
            ..:.:..|.|....:|        |..:|..|..|.. ::...|.|.....:..||..|.:.|  
  Fly   862 TDVSSSTEASASESTDVSGASDSTGSTNASDSTPESS-TEASSSTDDSTDSSDNSSNVSESST-- 923

  Fly  1039 AMPYFQALLSNLQLLWPLQRFKDSRGQHLLQGEALKFGIDLSGKDFDQDESERVPAEQLPPEVLH 1103
                 :|..|::         .||..    ..:....|:..:.::.....|:.........:...
  Fly   924 -----EASSSSV---------SDSND----SSDGSTDGVSSTTENSSDSTSDATSDSTASSDSTD 970

  Fly  1104 SPSDPEYHEPSKSGPEADVPHVPPHMPHARWETGAAASTTAVPSLPNDGFVYRWMLGEWSQCSQE 1168
            |.||    :.:::.||:              .|.:..|:|...|...|.       ...|:.|.|
  Fly   971 STSD----QTTETTPES--------------STDSTESSTLDASSTTDA-------SSTSESSSE 1010

  Fly  1169 CGAAGSGLQRRTVSCQRAAKATSSGSTSDTENNVVDNSECFAHGL--ELPEFFQSCGNEACPQWS 1231
            ....||.....:.|.:... .:|.|||:|......||::....|.  |..:...:...|...:.:
  Fly  1011 SSTDGSSTTSNSASSETTG-LSSDGSTTDATTAASDNTDITTDGSTDESTDGSSNASTEGSTEGA 1074

  Fly  1232 KGDWTPCQRSHCHGRNTAMQRREVTCRYPNGTEGSICDE 1270
            ..|.|....|     :.:.:..:......:.||||..::
  Fly  1075 SEDTTISTES-----SGSTESTDAIASDGSTTEGSTVED 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 22/50 (44%)
TSP1 546..600 CDD:214559 15/53 (28%)
TSP1 750..807 CDD:214559 20/61 (33%)
IGc2 845..902 CDD:197706 10/69 (14%)
PLAC 1355..1384 CDD:285849
PpnNP_788752.2 TSP1 60..111 CDD:214559 22/50 (44%)
ADAM_spacer1 214..329 CDD:283607 12/120 (10%)
TSP1 468..521 CDD:214559 19/70 (27%)
TSP_1 645..693 CDD:278517 19/58 (33%)
Kunitz_BPTI 1611..1663 CDD:278443
Kunitz_BPTI 1670..1721 CDD:278443
Kunitz_BPTI 1729..1781 CDD:278443
Kunitz_BPTI 1789..1840 CDD:278443
Kunitz_BPTI 1848..1899 CDD:278443
KU 1920..1973 CDD:238057
Kunitz_BPTI 2001..2051 CDD:278443
KU 2071..2121 CDD:238057
Kunitz_BPTI 2127..2178 CDD:278443
KU 2192..2245 CDD:238057
KU 2251..2304 CDD:238057
KU 2316..2372 CDD:238057
WAP 2457..2497 CDD:278522
Ig 2521..2610 CDD:299845
IG_like 2530..2610 CDD:214653
IG_like 2627..2703 CDD:214653
Ig 2636..2701 CDD:143165
IG_like 2766..2841 CDD:214653
Ig 2768..2830 CDD:299845
PLAC 2851..2883 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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