DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and AdamTS-A

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster


Alignment Length:1098 Identity:217/1098 - (19%)
Similarity:319/1098 - (29%) Gaps:437/1098 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GGGGGAGGGPGQWSSWSDWSTCSRTCDGGIMHQMRRCGSP-----GS-CRGESTRYRICNMQPCP 124
            |.|....||   |..|:.::.||.||.||:....|.|..|     |. |.|...:||.||...||
  Fly   745 GYGRQVNGG---WGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKYRSCNTHQCP 806

  Fly   125 E-QQDFRSSQCSAYN----DVPYDGTLYKWTPHYDYVEPCALTCRGHPAHLVEDISRETGDGNAE 184
            . ..|.|..||.|.|    ::|......||.|.|: .:.|.|.||                    
  Fly   807 PGSMDPREQQCYAMNGRNMNIPGVNPDTKWVPKYE-KDACKLFCR-------------------- 850

  Fly   185 EAEHYDEQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC 249
                .|.:.....|.:.|.|||.|...|.|.|:.|.|:..|||.::.|..|:|.||||.|..::|
  Fly   851 ----MDMKVTYFMLKSMVTDGTSCAVDSFDKCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTC 911

  Fly   250 ------------------SQP-------------------------------------------- 252
                              ::|                                            
  Fly   912 HEVTGNLLVSNLLGLNDGNEPNKTLYYVTRIPKGASNIIITQRGYPDQNFIVLTDDRDNELLNGK 976

  Fly   253 ----------------------------------------------------------------- 252
                                                                             
  Fly   977 FLKTYPLKFVYAGVTMQYTGSSSVVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYT 1041

  Fly   253 ------------LFNWEMAPMSQCSVTC-GSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASVE 304
                        ::.|||...|.|...| |..:::  |.|.:......|....|..:..|:....
  Fly  1042 IDKPPDYEAEVEIYRWEMQAPSNCDSLCEGRSHRL--PACISTTQGVKVAPQFCDKSAMPKIDDR 1104

  Fly   305 QCNTHSCPPRWIADDWSTCSRLCGH-GYRERMVVCAEE-SNGIKTRVADI-MCRTPKPPTQETCI 366
            .||| .|.........|.||..||. |.||:...|.:. :|..::.:.|: .|:.    ..:...
  Fly  1105 ACNT-DCRLNLTVTSISECSAACGELGTREKTYACVQTFTNMQRSNIVDMSYCKL----KFDVAY 1164

  Fly   367 IEECPH--WEVEDWTGCSVSCGQGIQMRGVECKSTDGSLSAK-CDPLTKPG--------SMQQCS 420
            .|||..  |.:.:|:.||.|||.|.|.|...|...:..:|.. |:|.|||.        :.:.|.
  Fly  1165 HEECREGCWVLSEWSTCSKSCGTGSQQREAHCYLHNSRVSDDLCNPRTKPHLNTLIGICNTESCP 1229

  Fly   421 TGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEG 485
            |......:|  .....::|.....||..|:....|                              
  Fly  1230 TYTKSPNAL--AVSNWVIGEWGECNEWCEKTRSVS------------------------------ 1262

  Fly   486 LSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPSLDPTYIKDNEWSPC 550
               ...|  |.....||   :..|..:..|:                       .|..|  |:.|
  Fly  1263 ---CSHP--YGIGCGSR---KPKDVRKCCHI-----------------------KYTSD--WTDC 1294

  Fly   551 SVTCGEGIRRRTYNCKIFLEYSRTV-------ATVNDSLCEGKKPHDEVERCVEDPCMLPSHGFD 608
            ||.||||::|:..:|.  ..|...|       ..|::|.|..:|.|....|.....|.       
  Fly  1295 SVQCGEGVKRKKQSCT--RVYKPDVPGTRKRRVYVDESYCISRKVHRPKLRTTTKSCR------- 1350

  Fly   609 DQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELIINCVREDNGRVVSPFLCSPETKPE 673
                                                     |||                     
  Fly  1351 -----------------------------------------INC--------------------- 1353

  Fly   674 ARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTREVQCIHEVTRGGDNTMVVPNSMC-PQPPPAD 737
                         :||.||:..|...|....:||:|:|   .:..||.   |.:..| .:..|:.
  Fly  1354 -------------KWNASDWRRCPADCSEEYQTRDVRC---ESFQGDG---VEDKHCDAKKRPSK 1399

  Fly   738 RQYCNVLDCPVRWEVGEWSKCSHTCGYGFKDRKVECKQIMAQEHKIERPESMCPSAKPADKKPCN 802
            |:.||  :| ||.:....|:|:  | .|.:.|:..|    ...||   ....||:....::..|.
  Fly  1400 RRICN--NC-VRRQSRVISQCN--C-EGVEKRRDFC----FNSHK---GRIACPTRARVERHSCT 1451

  Fly   803 VKPCPPEDPKPVIQINNSTHIQHDPKKTKITL-----KVGGAGLVFFGTQVKIKCPVKRYNRTKI 862
                ||...:....|.:|  |...|:.|.::.     .:||:                 .||...
  Fly  1452 ----PPPHCRRRSAIGSS--ISSRPRGTGVSSSRSLNSIGGS-----------------RNRGTP 1493

  Fly   863 KWSKDHKPLQRSRKYKVSKKGALRILDITFRDAGVYSCHAGLSSAEISIEVKAKPGQQIE---EL 924
            :...|.|.:     :..:|.|..: |::..|...:| || |::|......|...|.:...   |.
  Fly  1494 RSCADLKEM-----HGYNKDGNYQ-LEVRSRMVHIY-CH-GMNSRTPQEYVNVDPQENYSIYYEY 1550

  Fly   925 EQQETERLVREKSGTE----------------------ALTSADMKSADGTGTSTAVG 960
            ..::|.....|..|.|                      .:...|.|.||..|.:..:|
  Fly  1551 RTKQTNSCPPESRGHEYYNDQNSGRTHFRKLRLNITDLRIMDNDFKFADSRGLAQKLG 1608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 18/51 (35%)
TSP1 546..600 CDD:214559 18/60 (30%)
TSP1 750..807 CDD:214559 11/56 (20%)
IGc2 845..902 CDD:197706 10/56 (18%)
PLAC 1355..1384 CDD:285849
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848
ZnMc_ADAMTS_like 455..655 CDD:239801
Reprolysin 457..655 CDD:279729
Salp15 <696..745 CDD:288931 217/1098 (20%)
TSP1 754..806 CDD:214559 18/51 (35%)
ADAM_spacer1 937..1042 CDD:283607 0/104 (0%)
TSP1 1172..1229 CDD:214559 17/56 (30%)
GON 1495..1687 CDD:285848 24/122 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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