DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and stl

DIOPT Version :10

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster


Alignment Length:433 Identity:90/433 - (20%)
Similarity:126/433 - (29%) Gaps:151/433 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GGPGQWSSWSDWSTCSRTC---------DG--GIMHQMRRC-GSPGSCRGESTRYRICNMQPC-- 123
            |.|..|..||:.|.|...|         :|  |:....|.| ..|..|.|...|:..||...|  
  Fly   678 GSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGLRTLNRSCLNFPSRCIGRDRRFVTCNTPQCHK 742

  Fly   124 -PEQ--QDFRSSQC--SAYNDVPYDGTLYKWTPHYDYVEPCALTCRGHPAHLVEDISRETGDGNA 183
             |.|  .||.:..|  :..:|....|...:.....|  ..|.:.||...              |.
  Fly   743 VPVQTINDFATQVCMQARKSDPELTGEGQQLPSTLD--ASCKIFCRTRT--------------NG 791

  Fly   184 EEAEHYDEQSVIVQLSARVQDGTRCRS-----GSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCG 243
            .::..:           ...|||.|::     ..:..||.|:|:|..||                
  Fly   792 TKSRRW-----------TFPDGTTCKAKQHNPEDITYCISGRCERFSCD---------------- 829

  Fly   244 GDGNSCSQPLFNWEMAPMSQCSVTCGSGYKMSRPICRNRL---TNADVDDTLCSVTNRPEASVEQ 305
               ||.|                   :.:||....|..|.   |....|......|||...:..|
  Fly   830 ---NSTS-------------------NFFKMDSSFCEARSVRPTRDSSDQESRQQTNRQRYAERQ 872

  Fly   306 CNTHSCPPRWIADDWSTCSRLCGHG---------YRERMVVCAEESNGIKTRVADIMCRTPKPPT 361
               ...|.:...::........|.|         |:.|        |..|....:|  ..|.||.
  Fly   873 ---EGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRR--------NYHKPYPPEI--PRPPPPA 924

  Fly   362 QETCIIEECPHWEVEDWT---GCSVSC---GQGIQMRGVECKSTDGSLSAKCDPLTKPGSMQQCS 420
            ..:.|..:.......:|.   ||..:|   .:|:|  ||..:            ||...|:|.||
  Fly   925 SASLIALDRSSSSESEWVAHPGCHSNCMTDSKGVQ--GVTSR------------LTGVESIQLCS 975

  Fly   421 TGIH---------------CGGSLNKVGGTIIVGS--SRSLNE 446
            ..|.               |.....||.|....|:  |.|::|
  Fly   976 YRIQPCERLQTAAEYAEQTCARYRQKVRGLSGHGAQISASIDE 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 17/60 (28%)
TSP1_ADAMTS 256..311 CDD:465950 10/57 (18%)
TSP1_ADAMTS 315..370 CDD:465950 11/63 (17%)
TSP1_ADAMTS 373..420 CDD:465950 12/52 (23%)
TSP1 546..600 CDD:214559
TSP1_ADAMTS 629..684 CDD:465950
TSP1_ADAMTS 688..746 CDD:465950
TSP1_ADAMTS 750..806 CDD:465950
Ig 845..914 CDD:472250
Ig strand B 848..852 CDD:409353
Ig strand C 861..865 CDD:409353
Ig strand E 883..887 CDD:409353
Ig strand F 897..902 CDD:409353
TSP1_ADAMTS 1157..1227 CDD:465950
TSP1_ADAMTS 1289..1343 CDD:465950
PLAC 1355..1384 CDD:462560
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801
ADAMTS_CR_2 561..625 CDD:465496
TSP1 683..741 CDD:214559 16/57 (28%)
Blue background indicates that the domain is not in the aligned region.

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