DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and Adamts6

DIOPT Version :10

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:NP_001102014.2 Gene:Adamts6 / 361886 RGDID:1307678 Length:1117 Species:Rattus norvegicus


Alignment Length:857 Identity:198/857 - (23%)
Similarity:282/857 - (32%) Gaps:338/857 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QSAGGGGGAGGGPGQWSSWSDWSTCSRTCDGGIMHQMRRCGSPGS------CRGESTRYRICNMQ 121
            ||..||         |.|||.|..|||||.||:...:|.|.||..      |.||..|||.||..
  Rat   555 QSIDGG---------WGSWSLWGECSRTCGGGVSSSLRHCDSPAPSGGGKYCLGERKRYRSCNTD 610

  Fly   122 PCP-EQQDFRSSQCSAYNDVPYDGTLYKWTPHY-DYVEPCALTCRGHPAHLVEDISRETGDGNAE 184
            ||| ..:|||..||:.::.:|:.|..|.|.|:. ..|:||||.|.                  ||
  Rat   611 PCPLGSRDFREKQCADFDSMPFRGKHYNWKPYTGGGVKPCALNCL------------------AE 657

  Fly   185 EAEHYDEQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC 249
            ....|.|:      :..|.|||:|.:.|||:||.|:|:.||||..:||..:.|.|.||||||::|
  Rat   658 GYNFYTER------APAVIDGTQCNADSLDICINGECKHVGCDNILGSDAREDRCRVCGGDGSTC 716

  Fly   250 S--QPLFNWEMAPMSQCSVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASVE-QCNTHSC 311
            .  :..|| :..|.        .||                    ..|...|..||. :....|.
  Rat   717 DAIEGFFN-DSLPR--------GGY--------------------LEVVQIPRGSVHIEVREVSM 752

  Fly   312 PPRWIA-----DDWSTCSRLCGHGYRERMVVCAEESNGIKTRVADIMCRTPKPPTQETCIIEECP 371
            ...:||     ||:..                    ||.                          
  Rat   753 SKNYIALKSEGDDYYI--------------------NGA-------------------------- 771

  Fly   372 HWEVEDWTGCSVSCGQGIQMRGVECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTI 436
             |.: ||                                  |.......|..|            
  Rat   772 -WTI-DW----------------------------------PRKFDVSGTAFH------------ 788

  Fly   437 IVGSSRSLNERSERQLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQS 501
                                                                      |...|  
  Rat   789 ----------------------------------------------------------YKRPT-- 793

  Fly   502 RLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPSLDPTYIKDNEWSPCSVTCGE---GIRRRTY 563
                   |||.::                |:.||:.:...:        .|...|   |||.: :
  Rat   794 -------DEPESL----------------EALGPTSENLIV--------MVLLQEQNLGIRYK-F 826

  Fly   564 NCKIFLEYSRTVATVNDSLCEGKKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKTYV 628
            |..|                                                ::.|..:....::
  Rat   827 NVPI------------------------------------------------VRTGSGDNEVGFM 843

  Fly   629 WREQGYTSCSASCLGGVEELIINCVREDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNYSDY 693
            |..|.:..|||:|.|||::..:.|.|.|:..:|....|.|::||....|.|:..||||.|...|:
  Rat   844 WTHQPWAECSATCAGGVQKQEVVCKRLDDNSIVQNNFCDPDSKPPENQRACSTEPCPPEWFIGDW 908

  Fly   694 TPCSKSCGIGIKTREVQCIHEVTRGGDNTMVVPNSMCPQPPPADRQYCNVLDCPVRWEVGEWSKC 758
            ..|||:|..|::||.|.||.:|....:.|:  ..|.|....|.:::.||...||.:|...:||:|
  Rat   909 LECSKTCDGGMRTRAVLCIRKVGPSEEETL--DYSDCLTHRPVEKESCNNQSCPPQWVALDWSEC 971

  Fly   759 SHTCGYGFKDRKVECKQIMAQEHKIERPESMCP-SAKPADKKPCNVKPCPPEDPKPVI----QIN 818
            :..||.|||.|.|.||   :.:.....|.:.|| .:||..:..|::..|||  |:.|.    |.:
  Rat   972 TPKCGSGFKHRIVLCK---SSDLSKTFPAAQCPEESKPPARIRCSLGRCPP--PRWVTGDWGQCS 1031

  Fly   819 NSTHIQHDPKKTKITLKVGGAGLVFFGTQVKIKCP--VKRYNRTKIKWSKDHKPLQRSRKYKVSK 881
            ....:....:..:.....|         |..:.||  |:..:..:.....|..||..:.:.|...
  Rat  1032 AQCGLGQQMRTVQCLSYTG---------QASVDCPEAVRPPSMQQCDSKCDSTPLSSTEECKDVN 1087

  Fly   882 KGALRILDITFR 893
            |.|...|.:.|:
  Rat  1088 KVAYCPLVLKFK 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 25/51 (49%)
TSP1_ADAMTS 256..311 CDD:465950 7/55 (13%)
TSP1_ADAMTS 315..370 CDD:465950 6/59 (10%)
TSP1_ADAMTS 373..420 CDD:465950 4/46 (9%)
TSP1 546..600 CDD:214559 7/56 (13%)
TSP1_ADAMTS 629..684 CDD:465950 19/54 (35%)
TSP1_ADAMTS 688..746 CDD:465950 19/57 (33%)
TSP1_ADAMTS 750..806 CDD:465950 19/56 (34%)
Ig 845..914 CDD:472250 12/51 (24%)
Ig strand B 848..852 CDD:409353 0/3 (0%)
Ig strand C 861..865 CDD:409353 0/3 (0%)
Ig strand E 883..887 CDD:409353 1/3 (33%)
Ig strand F 897..902 CDD:409353
TSP1_ADAMTS 1157..1227 CDD:465950
TSP1_ADAMTS 1289..1343 CDD:465950
PLAC 1355..1384 CDD:462560
Adamts6NP_001102014.2 Pep_M12B_propep 43..191 CDD:460254
ZnMc_ADAMTS_like 250..465 CDD:239801
ADAMTS_CR_2 480..548 CDD:465496
TSP1 561..613 CDD:214559 25/51 (49%)
ADAMTS_CR_3 618..716 CDD:437068 46/121 (38%)
ADAMTS_spacer1 719..829 CDD:461796 36/324 (11%)
TSP1_ADAMTS 844..899 CDD:465950 19/54 (35%)
TSP1_ADAMTS 903..959 CDD:465950 19/57 (33%)
TSP1_ADAMTS 963..1017 CDD:465950 19/56 (34%)
TSP1_ADAMTS 1022..1071 CDD:465950 7/57 (12%)
PLAC 1083..1115 CDD:462560 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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