DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and Adamts19

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_006525982.1 Gene:Adamts19 / 240322 MGIID:2442875 Length:1234 Species:Mus musculus


Alignment Length:876 Identity:203/876 - (23%)
Similarity:299/876 - (34%) Gaps:342/876 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ELEQQKRSKVQSAGGGGGAGGGPGQW-----------------SSWSDWSTCSRTCDGGIMHQMR 100
            |.|.:.|:|:.....|...  .||:|                 ..||.||:|||:|..|:..:.|
Mouse   599 EGEAECRTKLDPPMDGTDC--DPGKWCKAGECTRRTPAPEHLAGEWSPWSSCSRSCSSGVSSRER 661

  Fly   101 RCGSPGS----CRGESTRYRICNMQPCPE-QQDFRSSQCSAYN-DVPYDGTLYKWTPHYDYVEPC 159
            :|...||    |.|...:||||...|||. ...||..||.||: ...|.....:|...:|..:||
Mouse   662 KCPGLGSEARDCNGPRKQYRICENPPCPAGLPGFRDWQCQAYSVRTSYPKHALQWQAVFDEEKPC 726

  Fly   160 ALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRV 224
            ||.|        ..:.:              ||.|:  ||.:|.|||.|....||:|..|:||:.
Mouse   727 ALFC--------SPVGK--------------EQPVL--LSEKVMDGTSCGYQGLDICANGRCQKA 767

  Fly   225 GCDLKIGSTKKIDGCGVCGGDGNSCSQPLFNWEMAPMSQCSVTCGSGYKMSRPICRNRLTNADVD 289
            |||..:||..:.|.||||.|:|.||                                ::...|.:
Mouse   768 GCDGLLGSLAREDHCGVCNGNGKSC--------------------------------KVIKGDFN 800

  Fly   290 DTLCSVTNRPEASVEQCNTHSCPPRWIADDWSTCSRLCGHGYRERMVVCAEESNGIKTRVADIMC 354
            .|.                                   |.||.|.:|:.| .:..||        
Mouse   801 HTR-----------------------------------GAGYVEVLVIPA-GARRIK-------- 821

  Fly   355 RTPKPPTQETCIIEECP-----------------HWEVEDWTGCSVSCGQGIQ--MRGVECKSTD 400
                       ::||.|                 .|::|. :|.....|..:.  .||:..|   
Mouse   822 -----------VVEEKPAHSFLALRDASKQSINSDWKIEH-SGAFSLAGTTVHYLRRGLWEK--- 871

  Fly   401 GSLSAKCDPLTKPGSM-----QQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDADED 460
              :||| .|.|.|..:     |..:.|:|...::                        .||...|
Mouse   872 --ISAK-GPTTTPLHLLVLLFQDQNYGLHYEYTV------------------------PSDPLPD 909

  Fly   461 NEDENDEGDDVDDLESGQDTDDGEGLSYADQPL-LYAHRTQSRLNQEAPDEPRTMHLMNGNSNNN 524
            |:...:.|                       || ::.|.                          
Mouse   910 NQSSKEPG-----------------------PLFMWTHA-------------------------- 925

  Fly   525 FNRGEDESEGPSLDPTYIKDNEWSPCSVTCGEGIRRRTYNC-KIFLEYSRTVATVNDSLCEG-KK 587
                                 .|..|:.|||.|.|:...:| ||.   |:.::.|::..|:. .|
Mouse   926 ---------------------GWGDCNATCGGGERKTMVSCTKIM---SKNISLVDNKKCKDLTK 966

  Fly   588 PHDEVERCVEDPCMLPSHG--------------FDDQFPRDSIKVGVSEPGKTYVWREQGYTSCS 638
            |..::.:|.|.||.....|              ...:|.|               |....:|:||
Mouse   967 PEPQIRKCNEQPCQTSPCGTVTTLRQTVCHQLYISVRFTR---------------WMMTEWTTCS 1016

  Fly   639 ASCLGGVEELIINCVRE-DNGRVVSPF---LCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKS 699
            .:|..||:...:.|.:: :||.::..:   ...|  || |.|:.|..:.|...|....::.||..
Mouse  1017 RTCGKGVQSRQVACTQQLENGTLIRAWERDCLGP--KP-ATVQRCEGQDCMTVWEAGVWSECSVK 1078

  Fly   700 CGIGIKTREVQCIHEVTRGGDNTMVVPNSMCP-QPPPADRQYC-NVLDCPVRWEVGEWSKCSHTC 762
            ||.|::.|.|:|.:            |...|. ...|.:.:.| :...|.| |.||:|||||.||
Mouse  1079 CGKGVRHRTVRCTN------------PRKKCVLSTRPREAEDCEDYSKCYV-WRVGDWSKCSITC 1130

  Fly   763 GYGFKDRKVECKQIMAQEHKIE-RPESMC-PSAKPADKKPCNVKPCPPEDPKPVIQINNSTHIQH 825
            |.|.:.|.::|.      |||. |..:.| .|.|||..:||:::||..:     |.:|..|    
Mouse  1131 GKGMQSRVIQCM------HKITGRHGNECFSSEKPAAYRPCHLQPCNEK-----INVNTIT---- 1180

  Fly   826 DPKKTKITLKVGGAGLVFFGTQVKIKCPVKR 856
            .|:...:|.|.       .|.|..:.|.|.|
Mouse  1181 SPRLAALTFKC-------LGDQWPVYCRVIR 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 21/66 (32%)
TSP1 546..600 CDD:214559 17/55 (31%)
TSP1 750..807 CDD:214559 26/58 (45%)
IGc2 845..902 CDD:197706 5/12 (42%)
PLAC 1355..1384 CDD:285849
Adamts19XP_006525982.1 Pep_M12B_propep 161..276 CDD:366707
ZnMc_ADAMTS_like 328..545 CDD:239801
ADAM_CR_2 562..629 CDD:375321 8/31 (26%)
ADAM_spacer1 793..903 CDD:368694 29/195 (15%)
TSP1 1010..1063 CDD:214559 15/55 (27%)
TSP1 1066..1111 CDD:214559 13/56 (23%)
TSP1 1115..1170 CDD:214559 27/61 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11401
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.