DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and Adamts18

DIOPT Version :10

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_006530858.1 Gene:Adamts18 / 208936 MGIID:2442600 Length:1253 Species:Mus musculus


Alignment Length:936 Identity:205/936 - (21%)
Similarity:281/936 - (30%) Gaps:447/936 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GGAGGGP--GQWSSWSDWSTCSRTCDGGIMHQMRRCGSPGS------CRGESTRYRICNMQPCPE 125
            |..|..|  ||||:||.||.|||||.||:..|.|.|.:|..      |.|.|..|::||:.||||
Mouse   615 GELGPRPIHGQWSAWSKWSECSRTCGGGVKFQERHCSNPKPQYGGKYCPGSSRIYKLCNINPCPE 679

  Fly   126 QQ-DFRSSQCSAYNDVPYDGTLYKWTPHYDYVEP---CALTCRGHPAHLVEDISRETGDGNAEEA 186
            .. |||:.||:.||:.|:.|.||:|.| |..||.   |.|.|:                     |
Mouse   680 NSLDFRAQQCAEYNNKPFRGWLYRWKP-YTKVEEEDRCKLYCK---------------------A 722

  Fly   187 EHYDEQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS- 250
            |:::   ....:|.:|:|||.|.....|:||.|.|:.||||.::||....|.||||.||.::|. 
Mouse   723 ENFE---FFFAMSGKVKDGTPCSPHRNDVCIDGICELVGCDHELGSKAVSDACGVCKGDNSTCKF 784

  Fly   251 ----------------------------------------------------------------- 250
                                                                             
Mouse   785 YKGLYLSQHKANEYYPVVTIPAGARSIEIQELQLSSSYLAVRSLSQKYYLTGGWSIDWPGDFTFA 849

  Fly   251 ------QPLFN-----------------------------WEMA--------------------- 259
                  |..||                             |:.|                     
Mouse   850 GTTFEYQRSFNRPERLYAPGPTNETLVFEILTQGKNPGIAWKYALPKVMNVTQPATKRYHHTWRT 914

  Fly   260 PMSQCSVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWSTCS 324
            ..|.||||||.||...:.||. |..:..|:.:.|||..:|....:.||..|||..|:..:||.||
Mouse   915 VQSDCSVTCGGGYISIKAICL-RDQHTQVNSSFCSVRTKPATEPKICNAFSCPAYWLPGEWSACS 978

  Fly   325 RLCGHGYRERMVVCAEESNGIKTRVADIMCRTPKPPTQETCIIEECPHWEVEDWTGCSVSCGQGI 389
            :.|..|.:.|.:.|.::                ||..:|..:                       
Mouse   979 KSCAGGQQSRKIRCVQK----------------KPFQKEEAV----------------------- 1004

  Fly   390 QMRGVECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDS 454
                         |.:.| |::.|..:|.|:                                  
Mouse  1005 -------------LHSLC-PVSTPTQVQVCN---------------------------------- 1021

  Fly   455 SDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNG 519
                                            |:|..|                           
Mouse  1022 --------------------------------SHACPP--------------------------- 1027

  Fly   520 NSNNNFNRGEDESEGPSLDPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCE 584
                      :.|..|           ||.||.|||.|:|||...||     |....|:.:|||.
Mouse  1028 ----------EWSPSP-----------WSQCSKTCGRGVRRREVLCK-----SPAAETLPESLCS 1066

  Fly   585 GKKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELI 649
            .....:..|.||...|           |:                                    
Mouse  1067 SSPRPEAQEGCVLGRC-----------PK------------------------------------ 1084

  Fly   650 INCVREDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTREVQCIHE 714
                   |.|:                          :|..|.::.||.:||:|::.||::|:.:
Mouse  1085 -------NNRL--------------------------QWIASAWSECSATCGLGVRKRELKCVEK 1116

  Fly   715 VTRGGDNTMVVPNSMC---PQPPPADRQYCNVLDCPV------RWEVGEWSKCSHTCGYGFKDRK 770
            ..:|  ..:..|...|   .:|.....:.||...|||      .|....|.:|:.|||.|.:.|.
Mouse  1117 TLQG--KLITFPERRCRNIKKPSLELEEACNQRTCPVYSMAVASWYSSPWQQCTVTCGGGVQTRS 1179

  Fly   771 VECKQIMAQEHKIERPESMC-PSAKPADKKPCNVKPCP-PE--DPKPVIQINNSTHI--QHDPKK 829
            |.|.|       ..||.|.| ...||...:.||...|| ||  |....:...:..|:  ||    
Mouse  1180 VHCMQ-------QGRPSSSCLLHQKPPVLRACNTNFCPAPEKKDDPSCVDFFSWCHLVPQH---- 1233

  Fly   830 TKITLKVGGAGLVFFGTQVKIKCPVK 855
                   |.....|:|.|....|..|
Mouse  1234 -------GVCNHKFYGKQCCRSCTRK 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 24/51 (47%)
TSP1_ADAMTS 256..311 CDD:465950 21/75 (28%)
TSP1_ADAMTS 315..370 CDD:465950 12/54 (22%)
TSP1_ADAMTS 373..420 CDD:465950 5/46 (11%)
TSP1 546..600 CDD:214559 21/53 (40%)
TSP1_ADAMTS 629..684 CDD:465950 2/54 (4%)
TSP1_ADAMTS 688..746 CDD:465950 16/60 (27%)
TSP1_ADAMTS 750..806 CDD:465950 19/56 (34%)
Ig 845..914 CDD:472250 4/11 (36%)
Ig strand B 848..852 CDD:409353 0/3 (0%)
Ig strand C 861..865 CDD:409353
Ig strand E 883..887 CDD:409353
Ig strand F 897..902 CDD:409353
TSP1_ADAMTS 1157..1227 CDD:465950
TSP1_ADAMTS 1289..1343 CDD:465950
PLAC 1355..1384 CDD:462560
Adamts18XP_006530858.1 Pep_M12B_propep 99..237 CDD:460254
ZnMc_ADAMTS_like 327..528 CDD:239801
ADAMTS_CR_2 545..612 CDD:465496
TSP1 626..678 CDD:214559 24/51 (47%)
ADAMTS_CR_3 682..782 CDD:437068 45/124 (36%)
ADAMTS_spacer1 784..895 CDD:461796 5/110 (5%)
TSP1_ADAMTS 917..965 CDD:465950 19/48 (40%)
TSP1_ADAMTS 969..1025 CDD:465950 19/174 (11%)
TSP1_ADAMTS 1029..1082 CDD:465950 23/68 (34%)
TSP1_ADAMTS 1090..1149 CDD:465950 16/60 (27%)
TSP1_ADAMTS 1159..1205 CDD:465950 17/52 (33%)
PLAC 1220..1250 CDD:462560 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.

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