DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and Adamts13

DIOPT Version :10

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_006233941.3 Gene:Adamts13 / 102554393 RGDID:1311594 Length:1482 Species:Rattus norvegicus


Alignment Length:900 Identity:209/900 - (23%)
Similarity:307/900 - (34%) Gaps:323/900 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GQWSSWSDWSTCSRTCDGGIMHQMRRCGSP------GSCRGESTRYRICNMQPCPEQQ-DFRSSQ 133
            |.||||...|.|||:|.||::.:.|.|.:|      .:|.||..:.::||.|.|.:.| :|.|.|
  Rat   447 GHWSSWGPHSPCSRSCGGGVITRRRWCNNPRPAFGGRACVGEDLQAKMCNTQACEKTQLEFMSEQ 511

  Fly   134 CSAYNDVPY-----DGTLYKWTPHYDYVEPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQS 193
            |:..:..|.     ..:.|.|.....|.:...| ||    |:...:.                :|
  Rat   512 CAQTDRHPLQLSQGSASFYHWDAAVQYSQGDTL-CR----HMCWAVG----------------ES 555

  Fly   194 VIVQLSARVQDGTRC------RSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS-- 250
            .||.......|||||      ..|::.:|:.|.|:..|||.|:.|.:..|.|.|||||.::|:  
  Rat   556 FIVSRGDSFLDGTRCVPNGPREDGTVSLCLLGSCRTFGCDGKMDSQQVWDACQVCGGDNSTCTSQ 620

  Fly   251 ------------------------------QPLFN------------------------------ 255
                                          :|||.                              
  Rat   621 NGSFTAGRAREYVTFLIVTPNMTSAHVINHRPLFTHLAVRIQDHYIVSGKSSMSPNVTYPSLLED 685

  Fly   256 ----------------------------------------------------------------W 256
                                                                            |
  Rat   686 YRVEYRVTLTEDQLPRLEEIHIRGPVRDDIEIQVYRRYGGEYGGLTHPDITFTYFQRKQQAAWVW 750

  Fly   257 EMAPMSQCSVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWS 321
             .|....|||:||:|.:.....|:::..|..|.:..|..:.:|.|..|.|.:..|||.|:|||:.
  Rat   751 -AAKRGPCSVSCGAGLRWVTYSCQDQAQNKWVRNAQCQGSPQPPAWQEPCVSAPCPPHWVADDFG 814

  Fly   322 TCSRLCGHGYRERMVVCAEESNGIKTRVADIMCR--TPKPPTQ-ETCIIEECP-HWEVEDWTGC- 381
            .||..||.|.|||.:.|.|..||....:....||  ..:|..: |.|..:.|| .|||.|.:.| 
  Rat   815 PCSVSCGGGLRERSLRCVEAHNGFLKTLPPAPCRAVAQQPAGEVENCNSQPCPTGWEVSDPSPCV 879

  Fly   382 SVSCGQGIQMRGVEC-----KSTDGSLSAKC-----DPLTKPGSMQQCSTGIHCGGSLNKVGGTI 436
            |.:|..|::.....|     .|...:::..|     .|:.:|.....||.|              
  Rat   880 SSACEPGLESGSGTCVPRVGDSEKPAMAGPCRPDDMSPVPEPCVRTTCSPG-------------- 930

  Fly   437 IVGSSRSLNERSERQLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQS 501
                                           ...||.:..|::         |..|:        
  Rat   931 -------------------------------SGPVDTMSLGEE---------ASSPV-------- 947

  Fly   502 RLNQEAPDEPRTMHLMNGNSNNNFNRGEDESEGPSLDPTYIKDNEWSP----CSVTCGEGIRRRT 562
                                    ..|:..|:.         ::.|:|    ||::||:|::...
  Rat   948 ------------------------GSGKPSSQA---------EHVWTPLVGLCSISCGKGLKELY 979

  Fly   563 YNCKIFLEYSRTVATVNDSLCE-GKKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKT 626
            :.|.    .|.....|.:.||. ..||....|.|...||                      |.: 
  Rat   980 FLCM----DSVLKMPVQEELCGLASKPPSRWEVCRARPC----------------------PAR- 1017

  Fly   627 YVWREQGYTSCSASCLGGVEELIINCVREDNGRVVS-PF-LCSPETKPEARVRTCNDRPCPPRWN 689
              |..:....|..:|.||...|.|:||:.|:||.|| |. .|.|..:| .....|:..|||.||.
  Rat  1018 --WETRVLAPCPVTCGGGRVPLAIHCVQLDHGRPVSVPHSKCWPAPRP-GSFEDCSPEPCPARWK 1079

  Fly   690 YSDYTPCSKSCGIGIKTREVQCIHEVTRGGDNTMVVPNSMCPQ--PPPADRQYCNVLDCPVRWEV 752
            .....|||.|||:|..|:.|.|: ::.:|.||.  |..:.|..  .|||... |.:.||..||.:
  Rat  1080 VLPLGPCSASCGLGTATQMVACV-QLDQGHDNE--VDETFCKALVRPPASVP-CLIADCAYRWHI 1140

  Fly   753 GEWSKCSHTCGYGFKDRKVECKQIMAQEHKIERPESMCPS-AKPADKKPCNVKPC 806
            ..|::||.:||.|.:.|...|   :..:.::..|.:.|.. .||...:.|...||
  Rat  1141 STWTECSVSCGDGIQRRHGTC---LGPQAQVPVPANFCQHLPKPVTVRGCWAGPC 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 20/51 (39%)
TSP1_ADAMTS 256..311 CDD:465950 16/54 (30%)
TSP1_ADAMTS 315..370 CDD:465950 21/57 (37%)
TSP1_ADAMTS 373..420 CDD:465950 13/57 (23%)
TSP1 546..600 CDD:214559 16/58 (28%)
TSP1_ADAMTS 629..684 CDD:465950 19/56 (34%)
TSP1_ADAMTS 688..746 CDD:465950 20/59 (34%)
TSP1_ADAMTS 750..806 CDD:465950 14/56 (25%)
Ig 845..914 CDD:472250
Ig strand B 848..852 CDD:409353
Ig strand C 861..865 CDD:409353
Ig strand E 883..887 CDD:409353
Ig strand F 897..902 CDD:409353
TSP1_ADAMTS 1157..1227 CDD:465950
TSP1_ADAMTS 1289..1343 CDD:465950
PLAC 1355..1384 CDD:462560
Adamts13XP_006233941.3 ZnMc_ADAMTS_like 139..345 CDD:239801
ADAMTS_CR_2 363..433 CDD:465496
TSP1 449..501 CDD:214559 20/51 (39%)
ADAMTS_CR_3 503..617 CDD:437068 37/134 (28%)
ADAMTS_spacer1 620..741 CDD:461796 3/120 (3%)
TSP1_ADAMTS 755..804 CDD:465950 14/48 (29%)
TSP1_ADAMTS 808..866 CDD:465950 21/57 (37%)
TSP1_ADAMTS 960..1014 CDD:465950 16/57 (28%)
TSP1_ADAMTS 1018..1074 CDD:465950 19/56 (34%)
TSP1_ADAMTS 1078..1134 CDD:465950 20/59 (34%)
TSP1_ADAMTS 1138..1192 CDD:465950 14/56 (25%)
Blue background indicates that the domain is not in the aligned region.

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