DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and adamts10

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_004911053.2 Gene:adamts10 / 100494667 XenbaseID:XB-GENE-961723 Length:1139 Species:Xenopus tropicalis


Alignment Length:872 Identity:197/872 - (22%)
Similarity:285/872 - (32%) Gaps:364/872 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSPKIWAAL---FVTT-------LCL----------LDTQAAWAKKLNASQAFD----------- 41
            |:|.:|:|.   ::|:       |||          ..|||       ..||:|           
 Frog   463 TNPFVWSACSRDYITSFLDSGLGLCLNNAPPRQDFIYPTQA-------PGQAYDADDQCRFQHGV 520

  Fly    42 ------------DTW----------NTASDLE------NELEQQKRSKVQSAGGGGGAGGGPGQW 78
                        :.|          |:....|      |.:|:....|.:....|....|..|.|
 Frog   521 KSRQCKYGEVCSELWCLSKSGRCITNSIPAAEGTICQTNTIEKGWCYKRECVPFGTRPEGVDGAW 585

  Fly    79 SSWSDWSTCSRTCDGGIMHQMRRCGSPGS------CRGESTRYRICNMQPCPE-QQDFRSSQCSA 136
            .|||.|..|||||.||:...:|.|.||..      |.||..|||.||:..||. .||||..||:.
 Frog   586 GSWSSWGECSRTCGGGVSSSVRHCDSPRPTIGGKYCLGERKRYRSCNIDDCPAGSQDFREVQCAE 650

  Fly   137 YNDVPYDGTLYKWTPHY-DYVEPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQSVIVQLSA 200
            :::||:.|..|.|..:. ..|:.|:|.|.                  ||....|.|:      :|
 Frog   651 FDNVPFRGKYYSWKSYRGGGVKSCSLNCL------------------AEGFNFYTER------AA 691

  Fly   201 RVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS--QPLFNWEMAPMSQ 263
            .|.|||.||..|.|:|:.|:|:.||||..:||..|.|.|.||||||::|.  :.:||..:     
 Frog   692 AVIDGTLCRQDSYDICVNGECKHVGCDRILGSDTKEDKCRVCGGDGSTCETIEGIFNQSL----- 751

  Fly   264 CSVTCGSGYKMSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWSTCSRLCG 328
                                               ||...|:.       .||            
 Frog   752 -----------------------------------PEGGYEEV-------VWI------------ 762

  Fly   329 HGYRERMVVCAEESNGIKTRVADIMCRTPKPPTQETCIIEECPHWEVEDWTGCSVSCGQGIQMRG 393
                                        ||....                          |.:|.
 Frog   763 ----------------------------PKGSVH--------------------------IDIRQ 773

  Fly   394 VECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDAD 458
            :....:..:|.||                               .||...:|.|.          
 Frog   774 LNISLSYLALKAK-------------------------------EGSEYYINGRF---------- 797

  Fly   459 EDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSNN 523
                                                            .||.|:...:  ..:..
 Frog   798 ------------------------------------------------PPDTPQRFDV--AGTIF 812

  Fly   524 NFNRGEDESEG-PSLDPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCEGKK 587
            ::.|.::|.|. .:|.||                                      |.:|.....
 Frog   813 HYRRPQEEPESLEALGPT--------------------------------------NTTLIVMVA 839

  Fly   588 PHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELIINC 652
            ..:|:         ||...:....|.:.:      ...:|.|....:|.|||.|.|||:...:.|
 Frog   840 VREEI---------LPGIRYKFNAPINQV------TQNSYAWYLSSWTKCSAICAGGVQLQQVLC 889

  Fly   653 VREDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTREVQCIHEVTR 717
            .:..:|..||..||.|.::.:.:.|.||..||||.|....::.||:||..|::||.|.|...|: 
 Frog   890 KKFSDGSTVSGDLCDPSSRIQEKQRPCNTEPCPPEWAIGAWSECSRSCNSGVRTRSVICQRRVS- 953

  Fly   718 GGDNTMVVPNSMCPQPPPADRQYCNVLDCPVRWEVGEWSKCSHTCGYGFKDRKVECKQIMAQEHK 782
             |.:...:.::.||||.|:..:.||...||..|...:||:|:.:||.|::.|.|.|| |..|:..
 Frog   954 -GTDKKSLDDASCPQPRPSMLEPCNTDTCPPEWVALDWSECTPSCGPGYRHRVVLCK-IGDQDST 1016

  Fly   783 IERPESMCPSA-KPADKKPCNVKPCPP 808
            :  |.|.|.:. |||....|.::.|||
 Frog  1017 L--PHSHCQAKDKPATTMRCTLQRCPP 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 24/51 (47%)
TSP1 546..600 CDD:214559 3/53 (6%)
TSP1 750..807 CDD:214559 20/57 (35%)
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
adamts10XP_004911053.2 Pep_M12B_propep 74..217 CDD:396235
ZnMc_ADAMTS_like 276..489 CDD:239801 7/25 (28%)
ADAM_CR_2 504..572 CDD:407643 9/67 (13%)
TSP1 585..637 CDD:214559 24/51 (47%)
ADAM_spacer1 741..855 CDD:368694 32/364 (9%)
TSP1_ADAMTS 866..921 CDD:408800 19/54 (35%)
TSP1_ADAMTS 925..981 CDD:408800 19/57 (33%)
TSP1_ADAMTS 985..1039 CDD:408800 20/56 (36%)
TSP1_ADAMTS 1044..1093 CDD:408800
PLAC 1105..1137 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11725
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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