DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and adamts7

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_002933006.3 Gene:adamts7 / 100491770 XenbaseID:XB-GENE-6037434 Length:1781 Species:Xenopus tropicalis


Alignment Length:1729 Identity:353/1729 - (20%)
Similarity:532/1729 - (30%) Gaps:723/1729 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSPKIWAAL---FVTT-------LCLLDTQAAWAKKL----------------------NASQAF 40
            |||..|:..   ::|.       |||.|..   :|:|                      .:|.:|
 Frog   408 TSPLTWSHCSRDYITRFLDRGWGLCLDDPP---SKELLDFPSVPPGVLYDVAHQCRLQYGSSSSF 469

  Fly    41 -DDTWNTASDLENELEQQKRSKVQSAGGGGGAGGG------------------PGQWSSWSDWST 86
             .|..|..:.|...:.....||:.:|..|...|..                  .|.|.|||.||:
 Frog   470 CRDIDNVCNTLWCSVGSTCHSKLDAAVDGTNCGHNKWCFNGNCVPVGQRPAPVDGSWGSWSSWSS 534

  Fly    87 CSRTCDGGIMHQMRRCGSP----GS--CRGESTRYRICNMQPCP-EQQDFRSSQCSAYNDVPYDG 144
            |:|:|..|:.:..|.|.:|    |.  |.||..|:|:||:.||| :...||..|||.::.|||.|
 Frog   535 CTRSCGAGVQNAERHCTNPMPKYGGRYCLGERKRFRVCNILPCPSDTPSFRHLQCSRFDSVPYKG 599

  Fly   145 TLYKWTPHYDYVEPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQSVIVQLSARVQDGTRCR 209
            .|.:|||....:.||.|.|:.....:.|                        :|...|.|||.|.
 Frog   600 KLLQWTPVLSSINPCELHCQSETKLIAE------------------------KLLDAVIDGTPCF 640

  Fly   210 SG--SLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSCS--QPLFNWEMAPMSQCSVTCGS 270
            .|  |.||||.|.|:.||||.:|.|....|.||||.||.::|.  |..|:          .:.|.
 Frog   641 EGNTSRDMCINGICKNVGCDYEIDSNAVEDRCGVCHGDDSTCHTVQKTFD----------DSDGL 695

  Fly   271 GYKMSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWSTCSRLCGHGYRE-R 334
            ||               ||..|                  .||                |.|| |
 Frog   696 GY---------------VDIGL------------------IPP----------------GAREIR 711

  Fly   335 MVVCAEESNGIKTRVADIMCRTPKPPTQETCIIEECPH-------WEVEDWTGCSVSCGQGIQMR 392
            :...||..|.:..|..|                   |.       |.:: |.|            
 Frog   712 IEEVAEAGNFLALRSED-------------------PEKYFLNGMWTIQ-WNG------------ 744

  Fly   393 GVECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDA 457
                   |..::......|:.|:::                                        
 Frog   745 -------DYPVAGTTFTYTRTGNLE---------------------------------------- 762

  Fly   458 DEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSN 522
                                                          |..||              
 Frog   763 ----------------------------------------------NLTAP-------------- 767

  Fly   523 NNFNRGEDESEGPSLDPTYIK--DNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCEG 585
                       ||:.:|.:|:  ..|.:|       |:|           |..||....|:..|.
 Frog   768 -----------GPTYEPVWIQLLFQESNP-------GVR-----------YQYTVRRDQDNSNEI 803

  Fly   586 KKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGGVEELII 650
            ..|.                                     :.||...:|.|||:|..||:..::
 Frog   804 PLPE-------------------------------------FSWRYGTWTECSATCGIGVQRQMV 831

  Fly   651 NCVREDNGRVVSPFLCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGI-GIKTREVQCIHE 714
            :||.:..|.|...: |...|:|:.|.|:||:.||||||...|:..||.:||: |::.|.|.||..
 Frog   832 HCVEKMAGLVEERY-CDTLTRPDDRQRSCNEDPCPPRWWVGDWQQCSVTCGLGGLQKRTVLCIQR 895

  Fly   715 VTRGGDNTMVVPNSMCPQPPPADRQY---------CN-VLDCPVRWEVGEWSKCSHTCGYGFKDR 769
            |  |.|....:        .|||.|:         || ...||..|:.|.||:||.:||.|.:.|
 Frog   896 V--GLDEQRAL--------QPADCQHLLRPETSIPCNHHHPCPEVWQQGNWSQCSVSCGEGVQFR 950

  Fly   770 KVECKQIMAQEHKIERPESMC-PSAKPADKKPCNVKPCP-------------------------- 807
            .|.|..        ....|:| ||.:|.|::.|.:..||                          
 Frog   951 DVYCNN--------STEGSICDPSNRPLDRRACILAACPVDPFYKHFDWTGSGATNRNIFNDIFP 1007

  Fly   808 -----PEDPK------PVIQ----------------------------INNSTHIQHDPKKTKIT 833
                 |.:|:      .:.:                            ||....:.:||.:... 
 Frog  1008 GRPRSPSNPQHHGDENSISERDFTNPGDGGQGKGGNAFVDDFYYDYNFINFHEDLTYDPLENNY- 1071

  Fly   834 LKVGGAGLVFFGTQVKIKCPVKRYNRTKIKWSKDHKPLQRSRKYKVSKKGALRILDITFRDAGVY 898
            :.:.|.|          :.|||........:..|.|. :|..:.....:....::.....|....
 Frog  1072 IHLDGQG----------ENPVKELPTKPSHYDYDRKD-ERQNEESTQSEAPSSVITTKSLDLFTS 1125

  Fly   899 SCHAGLSSAEI-----------------------------SIEVKAKPGQQIEELE---QQETER 931
            |....|||:.|                             ..|:..|..:.||:.|   |:..|.
 Frog  1126 SIDHNLSSSTIFSSTTQQETKDIFSELVTISTYLSTEPITGEELSPKDKKHIEDDETIYQKNVES 1190

  Fly   932 LVREKSGTEALTSA---------------------DMKSADGTGTSTAVGPNSHVNGSAQQHGSR 975
            |.:..:....|.::                     |:...|...:|:...|.:.:|...||..|.
 Frog  1191 LTKLATDKSLLVTSYKPILRGLPDIFVQDTATHPLDVLPKDQLPSSSPYTPQNLLNYITQQPTSD 1255

  Fly   976 RR---------QQQSERLQNG--------------RERSRRPKSDGVQHADSSIMEDDLSQLVQS 1017
            ..         ...|:.|..|              ......|.||     .|..:|.|.|:|..|
 Frog  1256 MSVSSAQTYSLYHSSDELSPGSTIYPVYDFSESIVTNLPLYPISD-----TSPALEKDDSKLTVS 1315

  Fly  1018 EDRIPQPASASSGGSRTRTLLAMPYFQALLSNLQLLWPLQRFK-----------DSRGQHLLQGE 1071
             |.:|:....:|..:...|  ..|..:..:|.|    |:|...           ..:|...|...
 Frog  1316 -DLLPKTEQNNSLATPDTT--RDPLGEQTVSRL----PVQNQNITHDTTDDISLTPKGTVSLGEV 1373

  Fly  1072 ALKFGIDLSGKDFDQDESERVPA------EQLPPEVLHSPSDPEYHEPSKSGP------------ 1118
            .....:|:|.::...|.|:.:..      .......:.|.|...|.:||.:.|            
 Frog  1374 ETPLLLDISAENIAVDTSQDLTTNSKWRFSSSTESEISSDSKVSYPQPSSATPVHSLFTASTTLK 1438

  Fly  1119 ------EADV-----------------PHVPPHM--------PHARWETGAAASTTAVPSLP--N 1150
                  ..||                 .|:.|..        |:.|::       ||:|..|  |
 Frog  1439 STVVTDHFDVNLYTSKTTSSITRVSVSSHLDPKAKDRGTPVNPNKRYK-------TAIPGPPITN 1496

  Fly  1151 DGFVY------RWMLGEWSQCSQECGAAGSGLQRRTVSCQRAAKATSSGSTSDTENNVVDNSECF 1209
            :.:..      :|.:|.||:||..||.   |...|::.|:          .::||.       |.
 Frog  1497 NSWHLPGSQNNQWDVGNWSECSTSCGL---GAMWRSIRCR----------VNETET-------CN 1541

  Fly  1210 AHGLELPEFFQSCGNEACPQWSKGDWTPCQRS----------HC------------HGRNT---- 1248
            .:.:..|.  :.|....|..|:.|:|:.|.:|          ||            |.:||    
 Frog  1542 LNTMPAPA--RRCYLRPCASWTVGNWSKCSQSCGNGVKVRDVHCLDMRDKRVLRPFHCQNTVYKP 1604

  Fly  1249 ----------------------------AMQRREVTCRYPNGTEGSICDEYERPAMRQECYNERC 1285
                                        .||.|.|||     .:..:|:|..:|...:.|.:..|
 Frog  1605 REQIPCREQQCMEWYVSSWRECSEECGGGMQERLVTC-----PQMGLCNENLKPNGTRSCNDHPC 1664

  Fly  1286 EGVWRVEPWSECNAPCGRKGIKYRILQC--VWYGSRRPAGNVCKHQPRPAVMKVCKSPACQAQLS 1348
            . .|.|.||.:|.|.|| .||:.|.::|  :..|:.....::|.|:|.|..::.|....||.  |
 Frog  1665 T-KWAVGPWGQCTASCG-GGIQRRQVKCINIHTGAAEEDNSLCDHEPWPENLQKCNPQDCQQ--S 1725

  Fly  1349 SSPAQLCRD--SSRYCRNARAMGLCRLHRYKLKCCGSCE 1385
            .:.....||  :..:||..:.:|.|.|...:.:||.:|:
 Frog  1726 QNNVSCIRDRLTFSFCRTLKILGRCSLLTVQAQCCHTCQ 1764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 22/51 (43%)
TSP1 546..600 CDD:214559 10/53 (19%)
TSP1 750..807 CDD:214559 19/57 (33%)
IGc2 845..902 CDD:197706 8/56 (14%)
PLAC 1355..1384 CDD:285849 9/30 (30%)
adamts7XP_002933006.3 Pep_M12B_propep 29..169 CDD:396235
ZnMc_ADAMTS_like 227..434 CDD:239801 7/25 (28%)
ADAM_CR_2 449..513 CDD:407643 10/63 (16%)
ADAM_CR 497..657 CDD:417715 59/183 (32%)
TSP1 535..578 CDD:214559 16/42 (38%)
ADAM_spacer1 684..793 CDD:368694 38/335 (11%)
TSP1_ADAMTS 810..864 CDD:408800 20/54 (37%)
TSP1_ADAMTS 868..927 CDD:408800 20/68 (29%)
TSP1_ADAMTS 931..980 CDD:408800 19/56 (34%)
TSP1_ADAMTS 1509..1557 CDD:408800 16/69 (23%)
TSP1_ADAMTS 1560..1615 CDD:408800 10/54 (19%)
TSP1_ADAMTS 1618..1664 CDD:408800 10/50 (20%)
TSP1_ADAMTS 1667..1722 CDD:408800 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.