DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and adamtsl4

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_002935503.2 Gene:adamtsl4 / 100488255 XenbaseID:XB-GENE-986796 Length:1427 Species:Xenopus tropicalis


Alignment Length:1003 Identity:219/1003 - (21%)
Similarity:313/1003 - (31%) Gaps:431/1003 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KLNASQAFDDTWNTASDLENELEQQKRSKVQSAGGGGGAGG--------------GPGQWSSW-- 81
            ::.|.:|.......|||  :.|..:.||:.||....|....              .|.|...|  
 Frog   608 EITADEADQHHHQVASD--SVLLPRSRSQRQSQNRHGVDNSRVFQNLFREHPSVHRPAQSDPWPA 670

  Fly    82 ---SDWSTCSRTCD-GGIMHQMRRCG-----SPGS----CRGESTRYRICNMQPCPE-QQDFRSS 132
               |......|..| |..:||.....     :|.|    |.||..:|:.||.:.||. |.|.|:.
 Frog   671 FGRSPTVAHEREQDVGSSLHQNSELPQWNLYNPASEEFHCEGEQKQYKSCNQEACPSGQPDARAK 735

  Fly   133 QCSAYNDVPYDGTLYKWTPHYDYV--EPCALTCR--GHPAHLVEDISRETGDGNAEEAEHYDEQS 193
            .|:.:|...:.|.||:|....:..  :.|||.||  |:..:                        
 Frog   736 HCATFNSQEFMGRLYQWEAFTEVSGNQRCALNCRPIGYRFY------------------------ 776

  Fly   194 VIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC--------- 249
              |:.:.:|||||.|.:||||:|:.|:|...|||..:||...:|.||||||||::|         
 Frog   777 --VRHTEKVQDGTPCEAGSLDVCVDGQCLSPGCDGILGSNSTLDTCGVCGGDGSTCKFITGTFKE 839

  Fly   250 ----------------------------------------------------------------- 249
                                                                             
 Frog   840 TNVPIGYHKILEIPKGATQIKVRELTWSPNYLALRSRTGKSFINGNWAVDPAGRYEAGGTVFIYT 904

  Fly   250 ----------------------------------------------------------------- 249
                                                                             
 Frog   905 QPGREEQEGETFTAAGPTSEALDVYMIFQQDNPGISFQFFISSPTAADASGHQSNPSQQEYGALR 969

  Fly   250 -------------------------------------------------------SQPLFNWEMA 259
                                                                   .||.|.|:..
 Frog   970 SMSASETLANTGSRTQPPDDRPLVPPPQSRQRPVSTLQRNIRVPPLQSPPVHYWPEQPQFFWKRV 1034

  Fly   260 PMSQCSVTCGSG--YKMSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCPPRWIADDWST 322
            ..:.|||:||.|  |.:.:.:.||.|  .:|.:..|.::|:|....|.|||..||..|...:||.
 Frog  1035 GSTACSVSCGKGFWYPVYQCVSRNSL--EEVSEEECDLSNKPFPQEEACNTQPCPAFWDVGNWSV 1097

  Fly   323 CSRLCGHGYRERMVVCAEESNGIKTRVADIMC-RTPKPPTQETCIIEECPHWEVE-DWTGCSVSC 385
            |||.||:|.:.|.|:|.:......|.|....| ...||...:||.:..|.|||:: :|:.|||.|
 Frog  1098 CSRTCGNGIQHRQVLCRQMYANRTTMVHPQRCSHLVKPNVTQTCQLRICSHWEIQSNWSTCSVMC 1162

  Fly   386 GQGIQMRGVECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSER 450
            |.|.:.|.|.|.|                                                    
 Frog  1163 GLGQRTRHVRCVS---------------------------------------------------- 1175

  Fly   451 QLDSSDADEDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMH 515
                           ::||:|.|.|.                   ::|.:.|.| ||.|      
 Frog  1176 ---------------NQGDEVGDGEC-------------------SNRLRPRTN-EACD------ 1199

  Fly   516 LMNGNSNNNFNRGEDESEGPSLDPTYIKDNEWSP-CSVTCGEGIRRRTYNCKIFLEYSRTVATVN 579
                             .||.:...:  .||||| ||..||.||:||:..|     .|.:....:
 Frog  1200 -----------------MGPCVRSWF--HNEWSPICSTECGTGIQRRSVFC-----LSSSPTDES 1240

  Fly   580 DSLCEGKKPHDEVERCVEDPCMLPSHGFDDQFPRDSIKVGVSEPGKTYVWREQGYTSCSASCLGG 644
            ...|.|.||.| :..|...||                       .:|..|....:|.|||.|..|
 Frog  1241 QESCGGSKPSD-MRVCNSGPC-----------------------ERTVKWYTGPWTQCSADCGDG 1281

  Fly   645 VEELIINCVREDNG--RVVSPFLCSPETKPEARVRTCNDRPCPPRWNYSDYTPCSKSCGIGIKTR 707
            .::..:.||.:...  .|..|..||...|| ..:::||..||.|.|..:.::.||:||..|::.|
 Frog  1282 SQKRDVICVSKLGAEFNVTDPSECSHLEKP-LPLQSCNAGPCGPSWFTTPWSACSQSCLGGLQMR 1345

  Fly   708 EVQCIHEVTRGGDNTMVVPNSMCPQ-PPPADRQYCNVLDCPVRWEVG---EWSKC-----SHTCG 763
            ||:|:     ..|.:.   :..|.| ..|.|::.||...|....:..   .:..|     :..|.
 Frog  1346 EVRCL-----ASDKSF---SQQCDQDTKPEDKRVCNTQPCSAALDENCRDRYHNCAVVVQARLCV 1402

  Fly   764 YGFKDRKVECKQIMAQEHKIER---PES 788
            ||:  .|..|....|  |.::|   |||
 Frog  1403 YGY--YKQACCSSCA--HAVQRSVTPES 1426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 15/60 (25%)
TSP1 546..600 CDD:214559 20/54 (37%)
TSP1 750..807 CDD:214559 12/50 (24%)
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
adamtsl4XP_002935503.2 TSP1 45..>77 CDD:214559
ADAM_spacer1 831..945 CDD:368694 0/113 (0%)
TSP1_ADAMTS 1037..1086 CDD:408800 18/50 (36%)
TSP1_ADAMTS 1090..1146 CDD:408800 19/55 (35%)
TSP1_ADAMTS 1149..1203 CDD:408800 25/163 (15%)
TSP1_ADAMTS 1207..1260 CDD:408800 21/60 (35%)
TSP1_ADAMTS 1266..1322 CDD:408800 17/56 (30%)
TSP1_ADAMTS 1326..1377 CDD:408800 17/58 (29%)
PLAC 1385..1414 CDD:400844 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11921
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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