DRSC/TRiP Functional Genomics Resources

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Protein Alignment nolo and LOC100002059

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_001341935.2 Gene:LOC100002059 / 100002059 -ID:- Length:935 Species:Danio rerio


Alignment Length:597 Identity:133/597 - (22%)
Similarity:190/597 - (31%) Gaps:238/597 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GQWSSWSDWSTCSRTCDGGIMHQMRRCGSP-----GS-CRGESTRYRICNMQPCPEQ-QDFRSSQ 133
            |:|..|..:..|||:|.||:....|.|.:|     |. |:|...::|.||::||.:. :.||..|
Zfish   505 GRWGRWGLYGPCSRSCGGGVQLAKRDCNNPVPENGGKYCQGLRVKHRSCNLEPCKDSGKTFREEQ 569

  Fly   134 CSAYNDVPYDGTLYK----WTPHYDYV---EPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDE 191
            |..:|....:.....    |.|.|..|   :.|.|.||.:            |.|          
Zfish   570 CEMFNGFTLNTNRLSPSVVWVPKYSGVSVKDRCKLICRAN------------GTG---------- 612

  Fly   192 QSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC------- 249
              ....|:.:|.|||.|...:..:|:||||.:.|||.|:.|..|.|.||||||:..:|       
Zfish   613 --YFYVLAPKVVDGTPCSPDTSAVCVQGKCIKAGCDGKLNSNMKFDKCGVCGGENKNCKKVSGMF 675

  Fly   250 SQPLFNWEMA---PMSQCSVTCGS-GYKMSRPICRNRLTNADVDDTLCSVTNR------------ 298
            ::|:..:...   |:...:|.... ||:        .|.|   ||...:|.|.            
Zfish   676 TKPIHGYNFVIDLPIGAANVDVRQRGYR--------GLVN---DDNYLAVKNHHGKYLLNGNFVV 729

  Fly   299 ------------------PEASVEQCNT----------------HSCPPRWIADDWSTCSRLCGH 329
                              ...|||...|                ...|||.....:.|.      
Zfish   730 SAVEKDIIVKGSLLRYSGTGTSVETLQTSRPLKESLTVELLSVGKMTPPRVRYSYYQTV------ 788

  Fly   330 GYRERMVVCAEESNGIKTRVADIMCRTP-KPPTQETCIIEECPHWEVEDWTGCSVSCGQGIQMRG 393
            |.:|..:...||....:..|.:...:.. |.|..:|...:    |...||:.||||||.|:|.|.
Zfish   789 GNKESKIFKKEERIPAENSVLEDSNKVELKKPVYQTPSYK----WVTADWSKCSVSCGNGVQSRL 849

  Fly   394 VECKSTDGSLSAKCDPLTKPGSMQQCSTGIHCGGSLNKVGGTIIVGSSRSLNERSERQLDSSDAD 458
            ::|..:||.::..||...||.||:.|                                       
Zfish   850 IQCLGSDGKMATNCDGSQKPSSMKVC--------------------------------------- 875

  Fly   459 EDNEDENDEGDDVDDLESGQDTDDGEGLSYADQPLLYAHRTQSRLNQEAPDEPRTMHLMNGNSNN 523
                     ||..                                                    
Zfish   876 ---------GDPC---------------------------------------------------- 879

  Fly   524 NFNRGEDESEGPSLDPTYIKDNEWSPCSVTCGEGIRRRTYNCKIFLEYSRTVATVNDSLCEGKKP 588
                           ||: ...|||.||.|||:|.:||...|     .::|...:....|.|||.
Zfish   880 ---------------PTW-SIGEWSSCSKTCGKGFKRRPLRC-----MTQTGQFLPRDHCSGKKK 923

  Fly   589 HDEVERCVEDPC 600
            ..|::.|....|
Zfish   924 PQELDFCTVRSC 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 18/51 (35%)
TSP1 546..600 CDD:214559 19/53 (36%)
TSP1 750..807 CDD:214559
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
LOC100002059XP_001341935.2 Pep_M12B_propep 48..149 CDD:279848
Reprolysin 206..415 CDD:279729
ZnMc_ADAMTS_like 206..412 CDD:239801
ADAM_CR 426..495 CDD:301627
TSP1 507..558 CDD:214559 17/50 (34%)
ADAM_spacer1 669..785 CDD:283607 18/126 (14%)
TSP1 829..880 CDD:214559 24/165 (15%)
TSP1 882..935 CDD:214559 19/58 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I11015
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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